Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00069 ATGTCTGATTTGAGTGATAATTCGCGGTGCAGACACAATTTTCATGGCGTAGATCACAATCACAGGCCACACAGGGCAAGCCAAGCTGCTTCTCAAGCAATGAAGAACCTTTGTGCACAACATGGAGGTCAACTTAGGCTCGGCCACTTCCGCCTCTTGCGCCTCCTAGGCTCCGGCGATATCGGAAAAGTTTTCCTCTGTGAGATCAGCAAGTCTTTGAAGCCACACTCCAATTGTTACTATGCCATGAAAGTAGTGGACAGGAAGTCTCTGGCTCTGAAGAAGAAGCTGAAGAGAGCAGAGATGGAGGAACAAGTACTTAGTGTTATTGACCACCCTTTTCTGCCAACACTTCATGCAAAATTTGAAGCTCGTGAATACACATGTTTTGTCATGGATTACTGCCCTGGTGGCGACCTCTTCACGCTTCAGCAGAACCAGCCAGATCTTCGCTTTACGGTCTCCACAGCAAGATTCTTTGCGGCTGAGGTGCTTGTAGCTCTTGAATATCTGCATATGATGGGGATTGTGTATAGAGACCTGAAGCCAGAAAATGTGCTTATTCAAGAGGATGGACACATCATGCTCACTGACTTTGATCTCTCCCTTCACTTGGAAGTTCACCCCATGCTTCTTAAACAAGTTTCAATCAATAGGATCATGAAGAAGAAGAATAAGCCAATGCTGTGTTGCGGAGAATCATATGATTATGAGCATATAGCTAGAGGAAGGAATAGGAAGAAAGCAAGCATTAACATTATTGGTGGTAATGGCCATGCACAAGAGATTGAGGTTTCAGCTGAACCAGTCAACGGAAGATCACATTCTTTTGTTGGAACACATGAGTATTTGGCACCAGAGGTGATCTTGGGGTTAGGCCATGGAAGTGCTGTGGATTGGTGGGCATTTGGTGTGTTCCTGTATGAGCTATTATATGGATATACACCCTTCAAAGATGCATCAAGCAATGAGAAAACAATGAATAATATCCTGAGGAAGCGGTTGAGTTTCCCAAGACCAGGAACAAAGACTCATTCTGGGCAGGAGATTGCAAAGGCAGAGGATCTTATTGGGAAGCTGCTGATCAAGAATCCAAAGAGGAGAATGGGATACAACAGTGGATCTTGTGAGATTAAGAAACATGAGTTCTTTCAGGGGATTAACTGGGCCTTAATCAGATCAGCTAAACCACCTCTTCTTCCAAGAAATCCACACCAGCAAAAACGGAATTCATTTGACATGCCAAAACCAAGCTTCAAGAACAAGCCTGTGAGTCAACGGCCTGGTCAAATACCCTTCTTCTGA 1305 0.4452 MSDLSDNSRCRHNFHGVDHNHRPHRASQAASQAMKNLCAQHGGQLRLGHFRLLRLLGSGDIGKVFLCEISKSLKPHSNCYYAMKVVDRKSLALKKKLKRAEMEEQVLSVIDHPFLPTLHAKFEAREYTCFVMDYCPGGDLFTLQQNQPDLRFTVSTARFFAAEVLVALEYLHMMGIVYRDLKPENVLIQEDGHIMLTDFDLSLHLEVHPMLLKQVSINRIMKKKNKPMLCCGESYDYEHIARGRNRKKASINIIGGNGHAQEIEVSAEPVNGRSHSFVGTHEYLAPEVILGLGHGSAVDWWAFGVFLYELLYGYTPFKDASSNEKTMNNILRKRLSFPRPGTKTHSGQEIAKAEDLIGKLLIKNPKRRMGYNSGSCEIKKHEFFQGINWALIRSAKPPLLPRNPHQQKRNSFDMPKPSFKNKPVSQRPGQIPFF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00069 434 Gene3D Transferase(Phosphotransferase) domain 1 139 402 - -
Stsc90637g00069 434 Pfam Protein kinase domain 258 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00069 434 Pfam Protein kinase domain 51 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00069 434 MobiDBLite consensus disorder prediction 1 23 - -
Stsc90637g00069 434 SMART serkin_6 50 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00069 434 FunFam Serine/threonine-protein kinase OXI1 139 207 - -
Stsc90637g00069 434 ProSiteProfiles AGC-kinase C-terminal domain profile. 385 434 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc90637g00069 434 Gene3D Phosphorylase Kinase; domain 1 50 413 - -
Stsc90637g00069 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Stsc90637g00069 434 SUPERFAMILY Protein kinase-like (PK-like) 38 409 IPR011009 -
Stsc90637g00069 434 ProSiteProfiles Protein kinase domain profile. 50 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00069 434 PANTHER FLIPPASE KINASE 1-RELATED 5 408 - -
Stsc90637g00069 434 MobiDBLite consensus disorder prediction 398 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00069 Stsc-Chr90637 231915 233299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00069 15 408 AGC Kinase Gene Family AT2G26700 47.982 1.17e-137 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc90637g00069 Pkinase 1.8e-33 CL0016