Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00041 ATGGGGCTGTTGAGATGTGGAGCCTTGTTTTTCTGTGTGCTGCTTCTGTCCAAAACCTGCCTGGGTAAACAACAGCACATTCAGAAGATATATCCTGGCTTCAATGCATCTAAGCTGGATTGGGACGATTATAATGGAATGTTCTTGTTATCCAACAACTCTGCTTTTGCCTTTGGATTCTTCGGTACCCTTGATGTTTCCTTGTTTGTTCTAGTAGTCCTTCACCTCCGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTCAGGAATTCCAATAGATTTGTGTTTCAACAAAGCGGGAATGCATATTTGGAGGGTGGCAACGATGTGGTTTGGTCAACAAACACAACAGGACAGAGAGTAAGATCCATGGAGTTGCAGGACTCAGGGAATTTGGTGTTGATTGGGGAAAATGGGTCATCCATTTGGCAGAGTTTTCACCATCCCACTGATACTCTTTTGCCTGGTCAAGACTTTGTGGAAGGAATGACACTAAAAAGCTTTCCCAACCGCAACAACTTGTTCCATTTTCTTGGTTACAAGGCAGGTGATTTGGTTCTCTATGCAGGATTTGAGCCCCCGCAACAGTACTGGTCAAGCCAAAAGAATTTCAGTGGCAAGCTTCACTCTGCTTCTCTGGTGTCCAATTCATGGAATTTCTATGACAAGAACGGGGATTTGCTCGGGAAAACTGTTTTCTCTGACCATTCAGATCCTAACTCATTTTGGGTTGCTATTTTGGACCCTACAGGTGCCATCTCTTTCTATGATCTTAGCAAAGGGAAGGGTGCTACACCTGAGGCAACAAAAATACCACAAGACCCTTGTGGCATTCCTGAGCCTTGTGATCCTTACAACGTTTGCTTCTTTGAGAACTGGTGTGAATGCCCTGCACTTCTCAAATCTCGCTTTAACTGCAAGCCTCCCAATATCTCAACTTGTTCTAGGACTTCAACTGAACTTCTTTATGTTGGTGAGAAGCTTGACTATTTTGCACTTGACTATGTTGTACCCGTTTCAAAATCAGACATCAATGCCTGCAAAGATGCTTGCCTGGGAAACTGCTCTTGCCAAGTGTCCATTGATGATGGAAATGACCACAAAAAGCAAAAATATGGCACGCTGCTAATTGTTGTCATAGTAGCCTCCACAATTTTGGTCATTGTTAGTCTTGTGGCAGGGTTCTGGTACTATAACAAGAAGATGAATCATGCTAAGTATGAACAGGACACGTTGGAGGAGGATGATTTCTTTGATGGTCTCTCCGGAATGCCTACTCGGTTTACCTACGGTGCTCTCTCTACGGTGACAAAGAACTTCTCCACAAAAATTGGGGAAGGAGGTTTCGGCTCTGTGTATCTTGGTGTGCTTGAAGATGGAACTCAGTTGGCTGTGAAAAAATTGGAAGGTCTTGGACAAGGGACAAAAGAGTTCAAGGCTGAAGTGTCTATAATTGGAAGCATTCATCATGTTCATCTGGTCAAGCTTAAAGGATTCTGCGCCGAAGGTCCTCATCGCCTTCTAGTCTATGAATACATGGGGAGGGGCTCTCTGGACAAATGGATCTTCAAGAACAGTGAAAACGCTTTCTTGTTGACTTGGGATACAAGGTTCAACATTGCACTAGGCACGGCGAAGGGATTGGCCTATCTTCATGAGGAGTGTGAGGTGAAGATTGTCCATTGTGATATTAAGCCGCAAAATGTTCTTCTTGATGATAACTTCAGTGCTAAAGTTTCAGATTTTGGACTGGCTAAGCTAATGAACCGTGAACAAAGCCATGTGGTTACAACTCTAAGGGGAACAAGAGGGTATCTAGCACCAGAATGGATCACTAACTATGCAATTTCTGAGAAGAGTGATGTGTTCAGCTATGGCATGGTGTTGCTTGAGATCATTGGAGGGAGGAAGAACTATGATCAGTGGGAAGGCCCGGAGAAAGTGCATTTTCCTTCTTATGTGTTCAGAATGATGGAGGAAGGGAGACTGAGAGAAGTTATTGACAAAAAGATAGACATTGATGATAAGGATGAAAGGGCTATAAATGCTCTCAAAGTTGCTCTATGGTGTATACAAGATGATGTGAGCTTGAGGCCTTCCATGACAAAGGTAGTTCAAATGCTTGAAGGTATCTGCCCTGTCCCTGATCCACCATTATCTCAGTCTAGTTGTTTCTCAGCCTTCCTTAAAATGAGCAGCGGAGAAGCAAGTTCTTCAGGACAGGCAAGCCTCTACAGTAACATACCACTTTCTTGTGTTCAATTATCTGGACCAAGATGA 2289 0.4373 MGLLRCGALFFCVLLLSKTCLGKQQHIQKIYPGFNASKLDWDDYNGMFLLSNNSAFAFGFFGTLDVSLFVLVVLHLRSYKVVWTANRGLLVRNSNRFVFQQSGNAYLEGGNDVVWSTNTTGQRVRSMELQDSGNLVLIGENGSSIWQSFHHPTDTLLPGQDFVEGMTLKSFPNRNNLFHFLGYKAGDLVLYAGFEPPQQYWSSQKNFSGKLHSASLVSNSWNFYDKNGDLLGKTVFSDHSDPNSFWVAILDPTGAISFYDLSKGKGATPEATKIPQDPCGIPEPCDPYNVCFFENWCECPALLKSRFNCKPPNISTCSRTSTELLYVGEKLDYFALDYVVPVSKSDINACKDACLGNCSCQVSIDDGNDHKKQKYGTLLIVVIVASTILVIVSLVAGFWYYNKKMNHAKYEQDTLEEDDFFDGLSGMPTRFTYGALSTVTKNFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGLGQGTKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMGRGSLDKWIFKNSENAFLLTWDTRFNIALGTAKGLAYLHEECEVKIVHCDIKPQNVLLDDNFSAKVSDFGLAKLMNREQSHVVTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGPEKVHFPSYVFRMMEEGRLREVIDKKIDIDDKDERAINALKVALWCIQDDVSLRPSMTKVVQMLEGICPVPDPPLSQSSCFSAFLKMSSGEASSSGQASLYSNIPLSCVQLSGPR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00041 762 ProSitePatterns Protein kinases ATP-binding region signature. 447 470 IPR017441 GO:0005524
Stsc90637g00041 762 Pfam Protein kinase domain 444 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00041 762 PIRSF SRK 363 758 IPR024171 GO:0004674
Stsc90637g00041 762 PIRSF SRK 3 374 IPR024171 GO:0004674
Stsc90637g00041 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 204 IPR036426 -
Stsc90637g00041 762 Gene3D - 44 151 IPR036426 -
Stsc90637g00041 762 FunFam S-receptor-like kinase 5 516 720 - -
Stsc90637g00041 762 ProSiteProfiles Protein kinase domain profile. 441 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00041 762 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 723 - -
Stsc90637g00041 762 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Stsc90637g00041 762 Pfam D-mannose binding lectin 81 162 IPR001480 -
Stsc90637g00041 762 SUPERFAMILY Protein kinase-like (PK-like) 425 712 IPR011009 -
Stsc90637g00041 762 CDD STKc_IRAK 447 714 - -
Stsc90637g00041 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Stsc90637g00041 762 Gene3D Phosphorylase Kinase; domain 1 402 515 - -
Stsc90637g00041 762 CDD B_lectin 44 152 IPR001480 -
Stsc90637g00041 762 FunFam serine/threonine-protein kinase PBS1-like 409 515 - -
Stsc90637g00041 762 SMART blect_4 40 152 IPR001480 -
Stsc90637g00041 762 SMART serkin_6 441 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00041 762 Gene3D Transferase(Phosphotransferase) domain 1 516 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00041 Stsc-Chr90637 155996 158389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00041 379 721 Receptor kinase-like Gene Family AT5G20050 43.562 1.03e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc90637g00041 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00041 - - gmx:100816004 1214.13