Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00033 ATGGCCGTTATTTCTCTCTCCCTTGCCCCTTCTCTTCTCCCACCTTCTTCTTCGCCTTCGCCTTCGTCTTCTTCCTGCTTCTGTGGGGGGATCCCTCTCCGTTCCCACAAAAGCTTCCTTTCCATTCACTCTGCTTCTCCCTTTCCTTCTCTCGCTTCTAACTCCAACTTCTCCGGCTCTGCCCGCCGATTTCACACGGTGGTTTCTGCCTCCGCTGACTACTATGCTACTCTTGGAGTCCCCAAATCCGCAACAGGCAAGGAAATCAAAGCAGCTTATCGAAGGTTAGCCCGTCAGTACCATCCCGATGTAAACAAGGAGCCTGGAGCAACTGAAAAATTCAAAGAGATCAGTGCTGCTTATGAGGTGCTATCAGATGATAAGAAGAGGGCTTTGTATGATCAATATGGCGAGGCAGGAGTTAAAAGTACTGTTGGAGGAGGATCAAGCACCTATACGACCAATCCATTTGATTTATTTGAGACGTTTTTTGGGCCAAGTATGGGTGGCTTTGGTGGCATGGATCCTACTGGATTTGGAACACGTCGAAGTACTGTTACCAAGGGTCAAGACATCCGGTATGATTTCTCCTTGACATTTTCTGAAGCAATTTTCGGAACAGAAAAGGAATTTGAGCTTTCCCATTTGGAAACATGTGAAGTCTGTAGTGGTACTGGAGCAAAGATAGGCTCGAAGATGAGAATATGTTCAACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTCGGATTGTTCTCACAGGTTTCAGTATGCCCGGCCTGTGGAGGTGATGGTGAAATCATATCTGAATATTGCCGGAAATGCAGTGGTGAAGGACGTTTACGGGTTAAGAAAAATATCAAAGTTAAAGTTCCTCCAGGTGTTAGCTCAGGCAGTATTCTTAGAGTTACTGGGGAAGGTGATGCAGGACCAAGGGGGGGTCCTCCAGGAGATCTCTATGTATATCTTGATGTGGAAGAGATACCAGGAATTCAAAGAGATGACATTAATCTCCGCTCAACAATATCAATTAGTTATTTGGATGCTATACTAGGGTCTGTTGTGAAGGTCAAGACGGTTGAAGGCACTTCTGAACTACAAATACCTCCTGGCACCCAACCTGGTGATGTCCTTGTTCTTGCAAGAAAAGGTGTGCCGAAACTAAATAAACCATCTATACGTGGTGACCACTTATTCACAGTTAAAGTTACAATACCAAAACGTATTAGCACAAAGGAGCGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGAGACACAAGTGTCCGCTCAAAATCCCGTTCTAGAACTCATTCTTCCACAGCAAGTAGGGAAGCTCCTGCAGCTCAAAGGGTCGAAAGTTCAACAGCAACAGTTGAGGAAAAAACTGAACAATCAGAAGACCAAAATGATTTATGGAATAAATTGAAGGACTTAGCTGGGTCAGTGGCCAATGGAGCCCTTAAGTGGCTGAAAGATAATCTCTAG 1497 0.4529 MAVISLSLAPSLLPPSSSPSPSSSSCFCGGIPLRSHKSFLSIHSASPFPSLASNSNFSGSARRFHTVVSASADYYATLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGGSSTYTTNPFDLFETFFGPSMGGFGGMDPTGFGTRRSTVTKGQDIRYDFSLTFSEAIFGTEKEFELSHLETCEVCSGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPACGGDGEIISEYCRKCSGEGRLRVKKNIKVKVPPGVSSGSILRVTGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDDINLRSTISISYLDAILGSVVKVKTVEGTSELQIPPGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELASLGDTSVRSKSRSRTHSSTASREAPAAQRVESSTATVEEKTEQSEDQNDLWNKLKDLAGSVANGALKWLKDNL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00033 498 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 31 439 - -
Stsc90637g00033 498 FunFam Chaperone protein dnaJ A6 chloroplastic 219 283 - -
Stsc90637g00033 498 Gene3D DnaJ domain 70 174 IPR036869 -
Stsc90637g00033 498 CDD DnaJ 73 126 IPR001623 -
Stsc90637g00033 498 CDD DnaJ_zf 219 283 IPR001305 GO:0031072|GO:0051082
Stsc90637g00033 498 Pfam DnaJ domain 73 134 IPR001623 -
Stsc90637g00033 498 FunFam Molecular chaperone Hsp40/DnaJ family protein 335 427 - -
Stsc90637g00033 498 CDD DnaJ_C 190 413 - -
Stsc90637g00033 498 SMART dnaj_3 72 129 IPR001623 -
Stsc90637g00033 498 Gene3D - 189 325 - -
Stsc90637g00033 498 NCBIfam molecular chaperone DnaJ 73 426 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Stsc90637g00033 498 ProSiteProfiles dnaJ domain profile. 73 137 IPR001623 -
Stsc90637g00033 498 FunFam Putative Mitochondrial DnaJ chaperone 277 325 - -
Stsc90637g00033 498 Gene3D - 219 283 - -
Stsc90637g00033 498 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 421 IPR008971 GO:0006457|GO:0051082
Stsc90637g00033 498 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 286 IPR036410 -
Stsc90637g00033 498 PRINTS DnaJ domain signature 109 129 IPR001623 -
Stsc90637g00033 498 PRINTS DnaJ domain signature 93 108 IPR001623 -
Stsc90637g00033 498 PRINTS DnaJ domain signature 75 93 IPR001623 -
Stsc90637g00033 498 PRINTS DnaJ domain signature 129 148 IPR001623 -
Stsc90637g00033 498 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Stsc90637g00033 498 ProSiteProfiles Zinc finger CR-type profile. 206 288 IPR001305 GO:0031072|GO:0051082
Stsc90637g00033 498 Pfam DnaJ central domain 219 283 IPR001305 GO:0031072|GO:0051082
Stsc90637g00033 498 Hamap Chaperone protein DnaJ [dnaJ]. 70 482 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Stsc90637g00033 498 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 338 IPR008971 GO:0006457|GO:0051082
Stsc90637g00033 498 SUPERFAMILY Chaperone J-domain 69 179 IPR036869 -
Stsc90637g00033 498 MobiDBLite consensus disorder prediction 431 474 - -
Stsc90637g00033 498 MobiDBLite consensus disorder prediction 431 459 - -
Stsc90637g00033 498 MobiDBLite consensus disorder prediction 460 474 - -
Stsc90637g00033 498 Pfam DnaJ C terminal domain 192 410 IPR002939 -
Stsc90637g00033 498 FunFam Chaperone protein dnaJ A6 chloroplastic 70 176 - -
Stsc90637g00033 498 Gene3D - 335 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00033 Stsc-Chr90637 111875 117150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00033 74 180 C2H2 Transcription Factor Family AT1G74250 37.719 1.66e-10 61.6