Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00030 ATGTCTAAGGATACTAATTATTCTTCGTTACCCGTTAGCTCCTATCTAGAATTGCAACCTCAGAATGATTCCCCTGAATCCCTCCGTGGCCTCTCTTTCGACGATGAAACCCAGTATCTGGCCTCTAAGGGTGCACCTCATGACGATGATTTTGAAATCGACATTGATAATTACCCGCTTGTTGTTATTGGCCACAATCACGGTTCCGGTGTGCCCGGAGCTGTCTTTAATTTGACTACCACCATCATAGGTGCAGGGATGATGGCCCTCCCTGCTACCATGAAGGTTCTTGGAGTGGTTTTGGGGATTGTATTAATCATTCTTATAGGGATTTTGTCTGAGATTAGTGTAGAATTGTTGGTTAGATATTCAGTTTTGGTTAAAGCAACCTCCTACGGGGAGGTTGTTCAACATGCTATGGGAAAGACTGCCAGGGTTTTGTCTGAGATCTGTATCATACTCAACAATGGAGGTGTTCTCGTCGTTTACTTGATAATCATGGGTGATGTTATGTCTGGTAATGTTCACCATTTGGGGGTTTTTGACCAGCTAATGGGGAATGGTGTCTGGGATCACAGAAAGCTTGTTATTCTTGTTATCATGGTGGTTTTCCTCGCCCCTCTTTGTTCCCTCGACAAGATCGATTCCTTGAGCATGACTTCGGCCGCCTCCGTGGCCCTCGCAGTCGTCTTTGTTGTAGTTACCTTTTCTGTTGCCTTCATTAAGATTGTTGAAGGACGGATTGAGGCTCCTCGGTTGGGTCCTGATCTGAGCTCAAAGACGGCCATCTTGGATTTGCTTGTGGTGATTCCAATCATGACCAATGCATTTGTCTGCCATTTTAACGTGCAGCCAATATACAATGAGCTCGCAGGGCGGTCTCCTCAAAAGATGAATCGAGTGGGAAGGATCACCTTAATGCTGTGCATCCTAGTTTATATCTCAACAGCAATGTCTGGTTTTCTACTATTTGGGAAAGACACAGAGTCTGATGTGTTGACTAATTTTGACGAGGATCTTGGAGTTCCTTACAGCGCGGCCTTAGACTACATTGTCCGGGTTGGCTACATTCTTCACTTGATACTTGTTTTTCCTGTCATTCATTTCTCCCTGAGGCAAACAGTGAATGCTTTGTTGTTTGAGGGATCGCCTCCTCTATCTGAAAGCAGGAAGAGATCCTTGGGGCTCACAGCAGTTTTGTTGGTTCTCATATATGTTGGATCTACCATGATTCCAAACATCTGGACCGCTTTTAAGTTCACAGGGGCAACGACGGCACTTACATTGGGATTTATGTTTCCCTCTATTGTTGTGTTGAGATTAGGCCATCTAGGGGGTTTGAGCCAAGGAGAATGGATTCTATCATGGTTTATGTTGGTACTTTCAGTGGTGGTTAGCATAATTGGAGTCATTGGTAATGTCTATAGCATTCAGAGCAAGTCTGAGTGA 1449 0.4458 MSKDTNYSSLPVSSYLELQPQNDSPESLRGLSFDDETQYLASKGAPHDDDFEIDIDNYPLVVIGHNHGSGVPGAVFNLTTTIIGAGMMALPATMKVLGVVLGIVLIILIGILSEISVELLVRYSVLVKATSYGEVVQHAMGKTARVLSEICIILNNGGVLVVYLIIMGDVMSGNVHHLGVFDQLMGNGVWDHRKLVILVIMVVFLAPLCSLDKIDSLSMTSAASVALAVVFVVVTFSVAFIKIVEGRIEAPRLGPDLSSKTAILDLLVVIPIMTNAFVCHFNVQPIYNELAGRSPQKMNRVGRITLMLCILVYISTAMSGFLLFGKDTESDVLTNFDEDLGVPYSAALDYIVRVGYILHLILVFPVIHFSLRQTVNALLFEGSPPLSESRKRSLGLTAVLLVLIYVGSTMIPNIWTAFKFTGATTALTLGFMFPSIVVLRLGHLGGLSQGEWILSWFMLVLSVVVSIIGVIGNVYSIQSKSE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00030 482 PANTHER AMINO ACID TRANSPORTER 66 467 - -
Stsc90637g00030 482 Pfam Transmembrane amino acid transporter protein 68 472 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00030 Stsc-Chr90637 104277 106124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00030 4 482 Amino Acid or Auxin Permease AAAP Family AT1G80510 69.654 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00030 - - gmx:100791860 717.613