Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00013 ATGCCTGCTGGTGGTGTTGGTGTTGGGCAAACCATATGTGTAACCGGCGCCGGAGGTTTCATCGCCTCTTGGATGGTCAAACTTCTCCTTGAAAGAGGCTACTCTGTCAAAGGAACCCTCCGTAACCCAGATGATCCCAAGAATGGGCACTTGATGCAGTTGGAAGGAGCGGCGGAGAGGCTCACTCTTCACAAGGTCGACCTCCTTGACCTTGATTCTGTTAGAGCCGTCATTCACGGTTGCCATGGCGTCTTCCACACTGCTTCTCCCGTCACTGACAACCCCGAGGAGATGGTGGAGCCAGCAGTAAATGGAGCCAAGAATGTGATTGTAGCGGCTGCGGAAGCTAAAGTGAGACGCGTGGTGTTCACATCATCAATTGGCGCAGTGTACATGGACCCAGCGAGGAGCATCGACGAGGTGGTGGATGAATCCTGTTGGAGTGATCTAGAGTATTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGGCAGTGGCAGAAAAAGCAGCATGGGAAGAGGCAAAGGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTGTTGGTGCTTGGACCATTGCTGCAGCCAAGCATAAACGCGAGCACAATTCACATCCTCAAGTACCTCACTGGCTCCGCCAAGACTTATGCCAATGCCACGCAGGCCTATGTCCATGTCAGGGATGTCGCATTAGCTCACATTCTTGTTTACGAGACCCCTTCTGCTTCTGGTAGATACCTCTGCGCTGAAACTTCCCTCCACCGCGGAGACCTCGTCAACATTCTCGCCAAGCATTTCCCCGACTACCCTCTTCCCACCAAGTGTTCCGATGAAAAGAATCCAAGAGCAAAGCCCTACACCTTCTCTAACCAAAAGCTGAAGGACTTGGGATTAGAATTCACCCCCGTGAGTCAGTGTCTATATGAAACGGTTAAAAGCCTACAGGAGAAGGGCCACCTTCCTATTCCCCAAAAGGAACAAGATTCTCTTCAAGTTGAATAA 1005 0.5124 MPAGGVGVGQTICVTGAGGFIASWMVKLLLERGYSVKGTLRNPDDPKNGHLMQLEGAAERLTLHKVDLLDLDSVRAVIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIVAAAEAKVRRVVFTSSIGAVYMDPARSIDEVVDESCWSDLEYCKNTKNWYCYGKAVAEKAAWEEAKEKGVDLVVVNPVLVLGPLLQPSINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYETPSASGRYLCAETSLHRGDLVNILAKHFPDYPLPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPIPQKEQDSLQVE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00013 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 316 IPR036291 -
Stsc90637g00013 334 CDD FR_SDR_e 13 299 - -
Stsc90637g00013 334 Gene3D - 7 333 - -
Stsc90637g00013 334 FunFam Cinnamoyl-CoA reductase 1 4 333 - -
Stsc90637g00013 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 312 - -
Stsc90637g00013 334 Pfam NAD dependent epimerase/dehydratase family 12 243 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00013 Stsc-Chr90637 42761 45390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00013 9 275 Monolignol Biosynthesis Gene Families AT1G80820 74.532 4.70e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00013 K09753 - gmx:100796771 573.933