Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00004 ATGCCTTCAAGAGGGTTCCCTGCAAGTGTTAACAGGACAAAGAGCAAGGGGGTGTTCCTTGCACTGTCCATATCAGCTTGTGCTGTCATCTTGTGCTCCCTGATTTACTTCCTATACCATTTGTGGCAGTCTGTGGTGCACAGAGGAGCTAAAACCATCCCGTTCGAGGCAAGTGCTCCGTTGAAGCTGCAGAGGTTCTCCTACAAAGATTTGAAGCTAGCCAGCAACGGCTTTGACAGCTGCAACATCATAGGAAAGGGTGGTTCGGGCACTGTCTTCAGGGGAATACTCAAGGACGGCAAACTGATTGCCATAAAGAGGTTGGACTCCATGTCGGTGCAGGCAGAGCGAGAGTTCCAGAATGAGCTGCAGGTGCTGGGAGGGCTGAGGTCACCATTCTTGGTGGCCCTGCTGGGATACTGTGCGGAGAGGGACAAGAGGGTTTTGGTGTACGAGTACATGCCAAACAGAAGCCTCCAGGAGTCCCTCTTTGGAGATGTCAGCATGCCTTGGGACAGAAGGTTCTCCATTATCCTTGATGTTGCCAGGGCGCTAGAGTTCTTGCACGTCGGATGTGATCCGCCCGTCATTCATGGCGATGTCAAGCCTAGCAATGTCCTTCTCGATGCAGACTGCCGTGCCAAGATCTCTGACTTCGGCCTCTCCAGGATTAAGCTTGACCCTCCTGACTTTCCTGTCGACTTGTTCAGCCACAGCCAGGATCTTTCTGGTAACTTAACTGCTGACACACACACGCACACTCCCACTCGCACTCACACTCAGAGTGTTGATGAAGTTGATTTTGCTATCGCCTTGCAAGCTTCCTCTTCCTCCAAGAATACCATTACCAGGCCCTGCTTCAATGTTAGACCTCTCAACTTGAGTGAAGGTGAAATCACCCTCGCCCGTGTAAATGCTAACTTGGGAGCGGAAGATGATGAGTTCTCTAGCCTTGATTATAGCAAGGACCTAACTGGACTCCATTCTTCTTTGGTGGACGATGACAAGGCATGGGGAAAGGATTGGTGGTGGAAACAGGATGGAAGCGGTGAATTATGCAGCAGAGACTATGTCACCGAGTGGATAGGGAGTCAGATCTGCCCATCCAACTCCGATTGGGTTGGCCACAAACCTGACTTGGAAAGATCAGGTCCGATGGATAAAGCCAGTGATGCAGACGGACCCCAGTTACAGCAGATCTTCGGGATGGAAAGCACCCTTGAGAGAAAGAAGAAGAAGAAGCCAAGGAAGATGCGAGAGTGGTGGAAAGAAGAGCACATTGCTGAATTGAGCAAGCTCAAGAGTCTTCAAGCCAAGTGGAAGAAAGGATTGAAAGTGCCCCATTTTGATCTGGGCAGAAGGTTTTATTTTTGCAGACGAAAGAAGTTGGGAGAGGAGGGTGGAGAGAAGGAGTGCGATCAAAACGGGGAGTTCAGCTTCAGAAGAGGATGGAAGAAGAAGAAGAGCAGTCGTTCCATTGGAAGTGAGATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACAACCAGCATGAGAGGGACACTGTGTTATGTGGCTCCAGAGTACGGCGGCTGTGGCTTCTTAATGGAGAAGGCCGATATATATAGTTTTGGGGTTTTGATTCTTGTGATTGTGTCAGGCAGAAGGCCGCTACATGTTCTGGCATCCCCCATGAAGCTTGAGAAGGCTAACTTGATCAGCTGGTGTAGGCAACTTGCTCAAGCCGGTAACATTTTAGAGCTGGTGGACGAGAGATTGAAACAAGATTACAACAAGGACCAAGCAGGCCTCTGCATCAACTTGGCTCTTGCTTGCTTGCAAAGAATTCCAGAGTTGCGCCCAGATATTGGGGACATTGTTAAGATTTTGAAAGGGGAGATGGACCTTCCGCCACTTCCATTTGAGTTTTCCCCTTCACCACCTTCCAAATTATACAGCAGATCAAGGAGAAAACACAAGGGCAATGTCGAATAG 1980 0.4975 MPSRGFPASVNRTKSKGVFLALSISACAVILCSLIYFLYHLWQSVVHRGAKTIPFEASAPLKLQRFSYKDLKLASNGFDSCNIIGKGGSGTVFRGILKDGKLIAIKRLDSMSVQAEREFQNELQVLGGLRSPFLVALLGYCAERDKRVLVYEYMPNRSLQESLFGDVSMPWDRRFSIILDVARALEFLHVGCDPPVIHGDVKPSNVLLDADCRAKISDFGLSRIKLDPPDFPVDLFSHSQDLSGNLTADTHTHTPTRTHTQSVDEVDFAIALQASSSSKNTITRPCFNVRPLNLSEGEITLARVNANLGAEDDEFSSLDYSKDLTGLHSSLVDDDKAWGKDWWWKQDGSGELCSRDYVTEWIGSQICPSNSDWVGHKPDLERSGPMDKASDADGPQLQQIFGMESTLERKKKKKPRKMREWWKEEHIAELSKLKSLQAKWKKGLKVPHFDLGRRFYFCRRKKLGEEGGEKECDQNGEFSFRRGWKKKKSSRSIGSEMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRQLAQAGNILELVDERLKQDYNKDQAGLCINLALACLQRIPELRPDIGDIVKILKGEMDLPPLPFEFSPSPPSKLYSRSRRKHKGNVE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00004 659 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Stsc90637g00004 659 Pfam Protein kinase domain 81 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00004 659 MobiDBLite consensus disorder prediction 636 659 - -
Stsc90637g00004 659 Gene3D Transferase(Phosphotransferase) domain 1 154 262 - -
Stsc90637g00004 659 Gene3D Transferase(Phosphotransferase) domain 1 486 631 - -
Stsc90637g00004 659 SUPERFAMILY Protein kinase-like (PK-like) 66 643 IPR011009 -
Stsc90637g00004 659 FunFam Receptor-like serine/threonine-protein kinase At4g25390 482 631 - -
Stsc90637g00004 659 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Stsc90637g00004 659 ProSiteProfiles Protein kinase domain profile. 78 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00004 659 FunFam Receptor-like serine/threonine-protein kinase At4g25390 47 153 - -
Stsc90637g00004 659 SMART serkin_6 78 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90637g00004 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Stsc90637g00004 659 Gene3D Phosphorylase Kinase; domain 1 45 153 - -
Stsc90637g00004 659 PANTHER OS07G0586332 PROTEIN 10 654 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00004 Stsc-Chr90637 20152 22131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00004 493 625 Receptor kinase-like Gene Family AT3G58690 31.343 5.01e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Stsc90637g00004 Pkinase 1.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00004 - - adu:107459750 1081.63