Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00002 ATGCGTATGGACACTCTGGCCCTCGTTCAGGCACAGCCCTTTGCCGCCTCCCTAGCGGTGGCTGCTGTCTCGCTTTTCCTCTTCTTTTACCTACTAAACCGTAAACGCACCCCCGCAGCCGCTTCACTCGTGGTGGGTCTTGCCTCTTCACTTCCTAAAGTACCAGTGGTTCCGGGTTTGCCAGTCCTTGGTAATCTATTGCAATTGAAGGATAAGAAGCCCTATAAGACATTCGCACAGTTTGCCCAGAAATATGGTCCCATATACTCCATCAGGACCGGTGCCTCCTCCATTATTGTTCTCAACTCTGCCCATCTTGCCAAGGAGGCCATGGTTACCAGATATTCATCGATTTCATCAAGGAAGCTGTCAAATGCATTGACAATATTGACTTCCAATAAATGTATGGTTGCTATAAGTGACTACAATGACTTTCACAAAATGGTCAAAAAACTTATTCTTGCAAATGTTCTCGGACCCAATGCACAGAAGCGACATCGTCTCCATAGAGAAGAAATGGTGGAAAACATGTCGCGGCAGTTTAGTGAACATGTGAAGACCTCCTCTGATTCCCCCATTAATTTTAGGGATGCATTTTCTTCTCAACTTTTTGGATTGGCAATGAAGCAAGGTGTAGGAAGCGATGTGGACTCCGTTTATGTGGATGATTTTGGAAGTAGAATATCAAGGAAGGACATATATCAAATTCTAGTGGTGGACATAATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAGATGGATTCCAAATAAGAGCATGGAGACAAAAATTCAGAGGATGTGCTTCCGTAGGAAGGCAGTTATGAAAGCCTTGATCAATGAGCAGAAGAAGAGGATTGCTTCCGGAAAGAAAGTGAATTGTTACATTGACTACCTTTTATCGGAATCCAAAGAGCTAACCGAAGATCAAATCCTCATGCTTCTTTGGGAGACCATCATAGAGACTTCTGATACTACATTAGTTACTTCGGAGTGGGCTATATATGAACTTTCTAAAGACAAAATACGCCAGGATCGACTGTATGCAGAGCTCCAAAGTGTTTGTGGGGATGAAAGGGTGACAGAAGACCATTTGGCTAAGCTTCCTTATTTAGGGGCTGTATTCCATGAAACTTTGAGGAAGCACAGTCCAGCTCCCATTGTCCCACTAAGGCATGTTGATGAAGATACGGAAATAGGAGGATATCGCATTCCCGCTGGGAGTGAGATTGCTATAAACATATATGGGTGTAACATGGACAAGGAGACGTGGGAAAATCCTGAGCAGTGGATGCCGGAGAGGTTTCTAGACGATGAGGAGAAGTATGAGACGATGGATCTGTACAAGACAATGGCATTTGGGGCGGGGAAGAGGGTGTGCGCAGGGGCTCTGCAGGCGCAGCTCATAGCATGCTCCTCAATTGGGAGACTGGTTCAGGAATTCGAATGGGAACTGGCTCAAGGCGAGGAGGAGAATGTTGACACAGTTGGCCTTACCACCCACAGGTTGAATCCCCTCCTTGTCAAGATCAAGCCAAGAACCAAATGA 1563 0.4562 MRMDTLALVQAQPFAASLAVAAVSLFLFFYLLNRKRTPAAASLVVGLASSLPKVPVVPGLPVLGNLLQLKDKKPYKTFAQFAQKYGPIYSIRTGASSIIVLNSAHLAKEAMVTRYSSISSRKLSNALTILTSNKCMVAISDYNDFHKMVKKLILANVLGPNAQKRHRLHREEMVENMSRQFSEHVKTSSDSPINFRDAFSSQLFGLAMKQGVGSDVDSVYVDDFGSRISRKDIYQILVVDIMEGAIEVDWRDFFPYLRWIPNKSMETKIQRMCFRRKAVMKALINEQKKRIASGKKVNCYIDYLLSESKELTEDQILMLLWETIIETSDTTLVTSEWAIYELSKDKIRQDRLYAELQSVCGDERVTEDHLAKLPYLGAVFHETLRKHSPAPIVPLRHVDEDTEIGGYRIPAGSEIAINIYGCNMDKETWENPEQWMPERFLDDEEKYETMDLYKTMAFGAGKRVCAGALQAQLIACSSIGRLVQEFEWELAQGEEENVDTVGLTTHRLNPLLVKIKPRTK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00002 520 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Stsc90637g00002 520 Pfam Cytochrome P450 57 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 SUPERFAMILY Cytochrome P450 50 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 Gene3D Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90637g00002 520 FunFam Ent-kaurene oxidase 2 47 520 - -
Stsc90637g00002 520 CDD CYP77_89 84 511 - -
Stsc90637g00002 520 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 20 518 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00002 Stsc-Chr90637 10554 13667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00002 49 518 Cytochrome P450 AT5G25900 63.191 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00002 K04122 - gmx:100802970 731.48