Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90636g00028 ATGGGCGAAACAACGCAATCTTCTTCTGTTAATGGCAGCAGCACCGCCACCACAAGTTCTGAAGCCCCAAAGCCGAAGAAGAAGATATGCTGTGCTTGCCCTGAAACTAAGAGGCTCAGAGACGAATGCATAGTTCAGAACGGCGAAGACTCTTGTACAAAATGGATTGAAGCTCATCGTTTGTGTCTTCGTTCCGAGGGTTTCAATCCTCCTTCTGAGCTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTTCATGGCAACAAGGCTATCACAGAGTCATTTGTGATCCTTGAATACATCCATGAAACATGGAAGCAGCATCCATTGCTACCTCAGGACATAAGGAATGATGACATAGGAAGGATCAAGGTCTTGCTGGGTGAGGATATGATCTATGGCACTTGTATCACAGCTTCTAAATCAATAAGTTTCAAAGCACTATTGTTGCAGAAATCATTCAATTTTCGGGCTCGGTTCTTCTCCAATTGTTCTCCTAAGAAGATAAGAATGGATGGTAATCTTAATTGTAGCAATGAGGGCGATAAAAAGGGGTCTAGAGGTGCCTTGGTTGTCCTAGAAGGCTTGGATCGTTCTGGGAAGTCCTCTCAGTGTAGCAGACTAGTCAATTATTTGGAAGGGCAAGGATTCTCTGCTGAATTATGGAGATTTCCTGCCAGAAACACTGATGTTGGGAAAATGATATCTGCCTATCTTACAAACACTTCACAATTGGATGATCATACTATTCATCTCCTCTTCAGTGCCAACCGTTGGGAGAAGAGGTCACTGATGGAAACCAAACTCAAATCTGGAACAACCCTCATTGTTGACCGCTATTCGTATTCTGGTGTGGCTTTCTCCTCTGCCAAGGGACTTGATATTGAGTGGTGTAAGGCCCCAGAGGTTGGGTTGCTTGCTCCGGATCTAGTAGCTTACCTTGATATTTCACCAGAGAAAGCCTCAGAAAGAGGAGGGTATGGAGGTGAGAGATATGAAAAGTTGGAGTTTCAGAAAAAAGTTGCTGAAAGTTACAAAGCTCTCCATGATGTCTCCTGGAAGTTTGTAGATGCTTGCCAACCCATTGAAGATGTGGAGAAACAGTTGCAAGAGATAGTACTTGATTGTGTCACAGAGTGTCAGAAGGGGAAGAAGCCACTCTCCCCATTGTGGTCAAAATAA 1182 0.4425 MGETTQSSSVNGSSTATTSSEAPKPKKKICCACPETKRLRDECIVQNGEDSCTKWIEAHRLCLRSEGFNPPSELNPVHKKVPVLVHGNKAITESFVILEYIHETWKQHPLLPQDIRNDDIGRIKVLLGEDMIYGTCITASKSISFKALLLQKSFNFRARFFSNCSPKKIRMDGNLNCSNEGDKKGSRGALVVLEGLDRSGKSSQCSRLVNYLEGQGFSAELWRFPARNTDVGKMISAYLTNTSQLDDHTIHLLFSANRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEVGLLAPDLVAYLDISPEKASERGGYGGERYEKLEFQKKVAESYKALHDVSWKFVDACQPIEDVEKQLQEIVLDCVTECQKGKKPLSPLWSK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90636g00028 393 Gene3D CytochromE C oxidase copper chaperone 5 67 - -
Stsc90636g00028 393 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 109 IPR004045 -
Stsc90636g00028 393 MobiDBLite consensus disorder prediction 1 22 - -
Stsc90636g00028 393 SUPERFAMILY Thioredoxin-like 72 111 IPR036249 -
Stsc90636g00028 393 NCBIfam dTMP kinase 187 368 IPR018094 GO:0004798|GO:0005524|GO:0006233
Stsc90636g00028 393 CDD TMPK 190 375 - -
Stsc90636g00028 393 SUPERFAMILY Cysteine alpha-hairpin motif 17 70 IPR009069 -
Stsc90636g00028 393 Pfam Thymidylate kinase 193 368 IPR039430 -
Stsc90636g00028 393 ProSitePatterns Thymidylate kinase signature. 276 288 IPR018095 GO:0004798|GO:0005524|GO:0006233
Stsc90636g00028 393 Gene3D - 182 392 IPR027417 -
Stsc90636g00028 393 FunFam Thymidylate kinase 183 392 - -
Stsc90636g00028 393 MobiDBLite consensus disorder prediction 1 26 - -
Stsc90636g00028 393 FunFam Cytochrome c oxidase copper chaperone 5 70 - -
Stsc90636g00028 393 Pfam Cytochrome C oxidase copper chaperone (COX17) 26 69 IPR007745 GO:0005507|GO:0005758|GO:0016531
Stsc90636g00028 393 Hamap Thymidylate kinase [tmk]. 189 377 IPR018094 GO:0004798|GO:0005524|GO:0006233
Stsc90636g00028 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 377 IPR027417 -
Stsc90636g00028 393 PANTHER THYMIDYLATE KINASE 183 391 - -
Stsc90636g00028 393 Gene3D Glutaredoxin 68 113 - -
Stsc90636g00028 393 Pfam Glutathione S-transferase, N-terminal domain 74 102 IPR004045 -
Stsc90636g00028 393 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 30 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90636g00028 Stsc-Chr90636 206497 214584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90636g00028 73 137 Glutathione S-transferase Gene Family AT2G29420 50.769 5.66e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90636g00028 K00943 - gmx:100778161 436.032