Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90636g00010 ATGATCACAATCTTCTTCTTCTACTTCTTCTTCATCATCATCACTCCATCAACCTCTTCAGATACTTTAACTGCAACACAAATCCTCACAACCGACCAAACCCTCTTCTCACAAAACCAAACCTTCACTCTGGGCTTCTTCACACCTTCAAACGCCAACCACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAACCCCATTGACAGCTCCAAAGGCTGTCTCAAGATCGGACACAACGCCGGAAACTTTCTCCTCCTCAATTCTTCCGGGAACCCAACATGGTCATCCAACCACACCAACGCCAAGAATCCAATTCTCCAGCTTCTCGACACCGGTAACCTTGTTCTTCAAGATTCGTCAGACAACACCAATAACTACTTATGGCAGAGCTTCGATTACCCAACAGATACTTTGTTACCGGGGATGAAGATGGGTTTGAACTTGGACACAAGAAAAGATAAGTACTTAACATCATGGAAAGTCACAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGCTAGATTACCATGGTGTACCTGAGGGTTTCATCAGAAGAAACCAAACTATAATATACCGAACTGGTCCTTGGAATGGTGTCAGATTCAGTGGGGTCCCAAACATGAAAGACAACGCCAATGATCTCAAGTACAACTTCACTTATGATGATCATGCTGTGTGGTTCTCTTTCTCTGTTACAAATCCTTCATTGTTGTCAAGGATTATTCTGAATTCTGATGGCGAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACGAATTCTCTTACACACCAGCTCATGAATGTGATTACTATAGAGAGTGTGGCTCCTATGGAGTGTGTGATAACAATGCTTCACCGATTTGCACTTGCATGCATGGGTTTAGCCCTGAGAACAGAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGGTTTGGATTGTCCCAATGACAGGTTCTTGCATCTTCAGAACATGAAGCTGCCTGAGACAACAAGAGTGTTTCTGAATAAGAGTATGAGACTTGATGAATGTGAGAGCTTGTGCAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGTGGAACTGGTTGTGTTATGTGGATTGGTCAACTCCTTGACATGAGTGTCTTCCCTACCAATGGACAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGAATCTACTAGCTCCAACAAGAATCATAGAGTAGTTCAGGCTATTGGCATCACACTTAGTGTGCTTGTTTTAGTTTTGGGATTGGTTGCTCTTTGTTACATAAGGAAGAAGAGACAACAAAGATCTAGAGGTTTAATGAATGAGGTGGTGTCTTCAAGTGGAAGGAACATGGATGATCTAGAGTTGCCAATGTTTGATTTTGATACCTTAACAATGGCAACAAATAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTTGGCAGTGTTTATAAGGGCACATTGATTGAAGGCCAGGAAATTGCTGTGAAGAGGTTATCAGAGGACTCTGGGCAAGGAATTGAAGAGTTTAAGAATGAAGTTAAATTAATCGCCAAGCTCCAACACCGGAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATATGGAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAATCAAAAAGAGCCATGCTTGACTGGAAAAGGCGTTTCAATATTTTATACGGGATAGCTAAAGGACTTCTTTATTTACATCAAGACTCGAGATTTCGAATTATTCATAGAGATCTTAAGACAAGTAACATATTACTAGACAATGACATGAATCCAAAGATATCTGACTTTGGAATGGCTAGAATTTTTGACAGAGACCAAACACAAGCAAAAACATTAAGAATCGTTGGAACCTAG 1983 0.4115 MITIFFFYFFFIIITPSTSSDTLTATQILTTDQTLFSQNQTFTLGFFTPSNANHYYLGIWYNNINPQTIVWVANRDNPIDSSKGCLKIGHNAGNFLLLNSSGNPTWSSNHTNAKNPILQLLDTGNLVLQDSSDNTNNYLWQSFDYPTDTLLPGMKMGLNLDTRKDKYLTSWKVTGEDPSSGDYTLKLDYHGVPEGFIRRNQTIIYRTGPWNGVRFSGVPNMKDNANDLKYNFTYDDHAVWFSFSVTNPSLLSRIILNSDGEYQRYMWIQGRWNEFSYTPAHECDYYRECGSYGVCDNNASPICTCMHGFSPENREAWNLRDGSDGCVRNTGLDCPNDRFLHLQNMKLPETTRVFLNKSMRLDECESLCKRNCSCTAYANIDIRNGGTGCVMWIGQLLDMSVFPTNGQDLYVRLAAADIESTSSNKNHRVVQAIGITLSVLVLVLGLVALCYIRKKRQQRSRGLMNEVVSSSGRNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGSVYKGTLIEGQEIAVKRLSEDSGQGIEEFKNEVKLIAKLQHRNLVRLLGCCIEKDEKMLVYEYMENRSLDSILFDKSKRAMLDWKRRFNILYGIAKGLLYLHQDSRFRIIHRDLKTSNILLDNDMNPKISDFGMARIFDRDQTQAKTLRIVGT 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90636g00010 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 570 - -
Stsc90636g00010 660 Pfam Protein kinase domain 496 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90636g00010 660 ProSiteProfiles PAN/Apple domain profile. 334 414 IPR003609 -
Stsc90636g00010 660 Gene3D Hepatocyte Growth Factor 334 412 - -
Stsc90636g00010 660 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 654 - -
Stsc90636g00010 660 Pfam PAN-like domain 335 399 IPR003609 -
Stsc90636g00010 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 571 660 - -
Stsc90636g00010 660 CDD PAN_AP_plant 332 414 - -
Stsc90636g00010 660 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Stsc90636g00010 660 Pfam S-locus glycoprotein domain 205 312 IPR000858 GO:0048544
Stsc90636g00010 660 SMART serkin_6 495 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90636g00010 660 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 211 IPR036426 -
Stsc90636g00010 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Stsc90636g00010 660 Gene3D Phosphorylase Kinase; domain 1 469 570 - -
Stsc90636g00010 660 Gene3D - 15 143 IPR036426 -
Stsc90636g00010 660 ProSiteProfiles Bulb-type lectin domain profile. 20 141 IPR001480 -
Stsc90636g00010 660 ProSiteProfiles Protein kinase domain profile. 495 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90636g00010 660 CDD B_lectin 26 146 IPR001480 -
Stsc90636g00010 660 SMART blect_4 26 146 IPR001480 -
Stsc90636g00010 660 SMART ntp_6 334 413 IPR003609 -
Stsc90636g00010 660 Gene3D Transferase(Phosphotransferase) domain 1 571 660 - -
Stsc90636g00010 660 Pfam D-mannose binding lectin 68 172 IPR001480 -
Stsc90636g00010 660 SUPERFAMILY Protein kinase-like (PK-like) 473 660 IPR011009 -
Stsc90636g00010 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90636g00010 Stsc-Chr90636 94975 97934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90636g00010 429 660 Receptor kinase-like Gene Family AT4G05200 57.759 3.72e-82 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90636g00010 Pkinase 2.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90636g00010 - - aip:107621495 1018.45