Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90636g00009 ATGTCTCCCGAATATGCTATGGATGGAAACTTCTCCATAAAATCTGATGTTTTTAGCTTTGGGGTTATGGCATTGGAGATCATAACCGGGAGGAAGAATAAAGAGTTTTATAGTGATAACCATGAATTGAATCTCCTGGGAAATGTATGGAGGCATTGGCAAGAAGGAACAGCATTGACATTGATTGATCCATCCATTGGCAATTCATATACAGAATCTGAAGTAGTAAAATGCATACATATTGGGCTCTTATGTGTCCAAGAACGTGCAAAAGATAGACCAACAATATCTTCTGTGGTCTTAATGTTGAACAGTGAAGCTCCATCAATGCCAAAACCTAAAAATCCTGGATTTTCAGTGAGGAAAAATCATCCAAACACTGATTTTTCAAGTATGCAAGATGAATCATGGAGCGTGAATCAAGTTTCGATCACAATATTTGATCCTAGGTAG 453 0.3753 MSPEYAMDGNFSIKSDVFSFGVMALEIITGRKNKEFYSDNHELNLLGNVWRHWQEGTALTLIDPSIGNSYTESEVVKCIHIGLLCVQERAKDRPTISSVVLMLNSEAPSMPKPKNPGFSVRKNHPNTDFSSMQDESWSVNQVSITIFDPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90636g00009 150 MobiDBLite consensus disorder prediction 120 134 - -
Stsc90636g00009 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Stsc90636g00009 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 149 - -
Stsc90636g00009 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Stsc90636g00009 150 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Stsc90636g00009 150 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Stsc90636g00009 150 MobiDBLite consensus disorder prediction 107 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90636g00009 Stsc-Chr90636 94161 94908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90636g00009 1 150 Receptor kinase-like Gene Family AT4G23150 48.387 3.89e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90636g00009 PK_Tyr_Ser-Thr 9.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90636g00009 - - aip:107621495 223.402