Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90636g00003 ATGGAGAATAAATGGTTGGAGATGCCCAAAAGGAAGAGAGAGCACAAGGCAGTGACTCGTTGCGGATGCCCAACTGATTTCCGCATAAAGTCGAAAGTAGAAACTAGTCATTGGTATGTTTCTCGATTTGTGGATGAACACAACCACAAGCTCCTCCCCCCGAAGTTTGTGGATCACCTGCCTTCTTATTGCAGAATGTCTGATGTGGATTTTTCTCGTATGGATAGCCTTAGGGTAGTCAGTATTTCAATCTCGAAAATTTACGAGTCAATCGCCTCTCATACTGGAGGCTTCAAACATGTTTCATTTACAAAAAACCAGTGCATAATATATCCTTGGACTGATTTTTCATTTTCCCATTTCTTTCTATGTATATGA 378 0.4074 MENKWLEMPKRKREHKAVTRCGCPTDFRIKSKVETSHWYVSRFVDEHNHKLLPPKFVDHLPSYCRMSDVDFSRMDSLRVVSISISKIYESIASHTGGFKHVSFTKNQCIIYPWTDFSFSHFFLCI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90636g00003 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 108 - -
Stsc90636g00003 125 Pfam FAR1 DNA-binding domain 10 53 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90636g00003 Stsc-Chr90636 5988 7582 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc90636g00003 FAR1 5.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90636g00003 - - ahf:112711599 142.124