Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90635g00036 ATGCACAAACAAATTCAATCTGCTGGCAAACGAGGATTCTTTTCTAAAAGATCTGTGGGACCACAAGTTCGAGAGAAGCTTACATTCGAGGACATGCTTTGTTTCCAGAAGGATCCAATCCCAACATCGTTGCTTAAGCTGAACAGCGATTTGGCAAGTCGTTCAACAAAATTATTCCACATAATTTTGAAGTATATGGAAGTTGATTCATCCGATCGTGCATCTCCAATGAGCTTAGACGAACGAGTTGAGCTTGTAGGCAAACTATACAAGCAAAGTTTGAAACATTCAGAACTCCGAGATGAACTTTTTGTCCAAATATCAAAACAAACAAGGAACAACCCAGATAGGGAATCATTGATTAAAGCATGGGAGCTTATGTATTTATGTGTATCTTGCATGACTCCTAGTAAAGACATTGGGGGATATCTATCAGAATATATTCATCACATAGTAAATGGTGTGAATACCGATCCCGAGATACGAGCCATTGCATTGAATACATTGAATTCATTGAAGCGTTCCGTCAAGGCTGGTCCTAGGCATATAATTCCAGGGCCCAAGGAGATTGAAGCTCAGTTGACAGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACCTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTGGAGGAACTTGCAGGGATCATCAAGTTGTCAACATACTCTAGCTTTAGCCTCTTTGAATGTCGCAAAGCTGTTACTGCCTCCAAATCACCTGATTCTGAGGAGTATGTTGGGCTAGATGATAATAAACATATTGGGGATCTACTAGCAGAATTTAAGGCAGCAAAAGAACGAAGTAAGGGAGAAATTTTGCACTGTAAGTTGATCTTCAAGAAGAAACTATTTCGGGAATCGGATGAAGCTGTGACAGATCCAATGTTTATGCAGTTATCCTATGTACAATTGCAACATGATTATATTTTTGGACATTATCCGGTTGGAAGAGATGAAGCCTCCCAGCTATCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGGCCTGAATCATGCTCTGACTGGAGCTCATTTCTCGAGCGATTTCTGCCTAGACAAATTGCGATGACACGAGGAAGACGGGAATGGGAGCTGGACATTCTTTCTTGCTACCATTCACTGGAGCATCTGACAAAAGATGATGCAAGGCAGCAATTTCTGCATATACTCAGGACACTTCCATATGGGAATTCTGTTTTCTTCAACGTTCGCAAGATTGATGATCCAATCGGGCTTTTACCCGGACGAATAATATTAGGAATTAACAAAAGAGGGGTCCATTTTTTCCGTCCGGTTCCTAAGGAGTATTTGCATTCAGCTGAGTTGAGAGATATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCCGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGTGAGGAAATTTGTGTAGCTCTTCAAACACACATAAATGATGTAATGCTCCGTCGCTACTCTAAAGCACGGACTACTGCTGGTGGTTCTTTGAATGAAGATATCTCCAGTAATTTCAAGTCTCCTAATTCGGAATCATATGAGAAGCGTATCCAAGACTTATCGAAGGCTGCTGAAGAGTCTAAAAGAAATGCTGATCAATTGCGTGAAGAATTGCAAGAGAAACAAAAACAGGAAGAGAAAATGCTACAAGAGTTGGAAAGCTTGAAAGAATCCTTAAATGTTGATAAGCTTAGTCTTGAGGAAGTTACAAATGAACGTGATAGGCTTATCTCATTATGTGATGAAAAAGATAAGGCTCTTCAGGCTGCAATTCTAGAGAAAAGGAATATGGAAACAAGGATGACCAAGTTGAATAAATTGGTTACCGAGAAAGAAAATACTACCCAAAGGGAGCCTATTGGAGCAAATAAGCAAAATTCTTCTATTCAATTGAAACTTGAACAAGAACGCAAAACTCTGAAAGGTCAAGTTTATGATCTCGAAAGAAAAGTAGAAGTATTCAGACAAGAGTTAGTTGCTGCTGAGTCTACACTTTCAGTCAAGGACTCTGAATTGACTGCACTGAAGAACAATTTGAGAGAGCTTGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAACAAACAAACAGCTGCCATATTGAAGATGCAAGCAGCTCAACTAGCTGACATGGAGTTGCTTTATAAGGAAGAACTAGTTTTGAGGAAGCGATATTTTAATACGATAGAAGATATGAAAGGCAAGATAAGAGTTTACTGTCGGCTAAGACCTCTAAGTGACAAAGAGATTGCTGAGAAAGATGGAAATTCTCTTACTACTGTAGATGAGTTTACTGTTGAGCATCAATGGAAAGACGATAAACCGAAACAACACATATATGATCACGTGTTTGATGGCAATGCCACTCAAGAAGATGTATTTGAGGATACAAGGTACTTGGTGCAATCGGCAGCAGATGGTTATAATGTCTGCATTTTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATTTATGGTTCTGAAAGCAATCCTGGGCTTACCCCGCGTGCCACTGCCGAACTTTTTAGAATCTTAAGGAGAGATAGTAACAAGTTTTCATTTTCCTTGAAGGCATACATGGTGGAATTATACCAAGATACACTTGTTGATCTTTTGTTACCAAAGAATGCCAAGCGTTTAAGATTGGATATTAAGAAGGATTCAAAGGGAATGGTAACTGTGGAAAATGTAACAACCGTGTCAATTTCCACTATGGATGAACTGAACAGCATAATACAAAAAGGATCTGAAAGGCGACACACTTCGGAAACACAAATGAATGAAGAAAGCTCAAGATCTCACCTTATTCTATCAATTGTAATTGAAAGTACTAACCTTCAAAGTCAATCAGCTGCAAGAGGAAAGCTGAGTTTTGTAGACCTTGCTGGTTCAGAGAGAGTGAAAAAATCAGGTTCTGAAGGTAGCCAACTTAAAGAAGCACAGAGTATCAATAAATCATTATCAGCAGTTGGAGATGTTATCAGTGCTTTATCTTCTGGTGGACAACATATTCCCTATAGGAATCACAAGTTAACCATGTTGATGAGTGACTCGTTGGGGGGAAATGCGAAAACTCTTATGTTTGTGAATGTCTCTCCAGCACAGTCTAACTTGGATGAGACTCATAACTCTCTTATGTATGCATCAAGGGTGAGGTCAATTGTGAATGATCCAAGCAAAAATGTTAGTTCAAAAGAGATAGCTAGGCTGAAGAAATTGGTGGCATATTGGAAGGAGCAAGCAGGTAGAAAAGGGGAGGATGAAGATTTAGAAGAAATTCAAGAAGTAAGACCTTCTAGAGATAGGACTGATGGCCGCCATTCTATGTAG 3417 0.3927 MHKQIQSAGKRGFFSKRSVGPQVREKLTFEDMLCFQKDPIPTSLLKLNSDLASRSTKLFHIILKYMEVDSSDRASPMSLDERVELVGKLYKQSLKHSELRDELFVQISKQTRNNPDRESLIKAWELMYLCVSCMTPSKDIGGYLSEYIHHIVNGVNTDPEIRAIALNTLNSLKRSVKAGPRHIIPGPKEIEAQLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSLFECRKAVTASKSPDSEEYVGLDDNKHIGDLLAEFKAAKERSKGEILHCKLIFKKKLFRESDEAVTDPMFMQLSYVQLQHDYIFGHYPVGRDEASQLSALQILAEIGFVRRPESCSDWSSFLERFLPRQIAMTRGRREWELDILSCYHSLEHLTKDDARQQFLHILRTLPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARTTAGGSLNEDISSNFKSPNSESYEKRIQDLSKAAEESKRNADQLREELQEKQKQEEKMLQELESLKESLNVDKLSLEEVTNERDRLISLCDEKDKALQAAILEKRNMETRMTKLNKLVTEKENTTQREPIGANKQNSSIQLKLEQERKTLKGQVYDLERKVEVFRQELVAAESTLSVKDSELTALKNNLRELEELREMKEDIDRKNKQTAAILKMQAAQLADMELLYKEELVLRKRYFNTIEDMKGKIRVYCRLRPLSDKEIAEKDGNSLTTVDEFTVEHQWKDDKPKQHIYDHVFDGNATQEDVFEDTRYLVQSAADGYNVCIFAYGQTGSGKTFTIYGSESNPGLTPRATAELFRILRRDSNKFSFSLKAYMVELYQDTLVDLLLPKNAKRLRLDIKKDSKGMVTVENVTTVSISTMDELNSIIQKGSERRHTSETQMNEESSRSHLILSIVIESTNLQSQSAARGKLSFVDLAGSERVKKSGSEGSQLKEAQSINKSLSAVGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAQSNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRKGEDEDLEEIQEVRPSRDRTDGRHSM 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90635g00036 1138 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 415 524 - -
Stsc90635g00036 1138 ProSiteProfiles MyTH4 domain profile. 35 194 IPR000857 GO:0005856
Stsc90635g00036 1138 CDD FERM_B-lobe 312 410 IPR019748 -
Stsc90635g00036 1138 Gene3D MyTH4 domain 15 195 IPR038185 -
Stsc90635g00036 1138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 762 1112 IPR027417 -
Stsc90635g00036 1138 Coils Coil 690 727 - -
Stsc90635g00036 1138 SMART MyTH4_1 35 194 IPR000857 GO:0005856
Stsc90635g00036 1138 CDD FERM_C_KCBP 414 520 - -
Stsc90635g00036 1138 Gene3D - 415 521 IPR011993 -
Stsc90635g00036 1138 MobiDBLite consensus disorder prediction 519 536 - -
Stsc90635g00036 1138 Gene3D - 309 410 IPR014352 -
Stsc90635g00036 1138 SUPERFAMILY PH domain-like 417 505 - -
Stsc90635g00036 1138 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 14 196 - -
Stsc90635g00036 1138 SUPERFAMILY Second domain of FERM 295 412 IPR035963 -
Stsc90635g00036 1138 Coils Coil 535 597 - -
Stsc90635g00036 1138 SMART B41_5 195 417 IPR019749 -
Stsc90635g00036 1138 Pfam MyTH4 domain 88 192 IPR000857 GO:0005856
Stsc90635g00036 1138 ProSitePatterns Kinesin motor domain signature. 983 994 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc90635g00036 1138 SMART kinesin_4 760 1091 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 MobiDBLite consensus disorder prediction 519 538 - -
Stsc90635g00036 1138 Pfam FERM central domain 303 417 IPR019748 -
Stsc90635g00036 1138 Coils Coil 612 639 - -
Stsc90635g00036 1138 ProSiteProfiles Kinesin motor domain profile. 762 1083 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 PRINTS Kinesin heavy chain signature 984 1002 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 PRINTS Kinesin heavy chain signature 1033 1054 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 PRINTS Kinesin heavy chain signature 834 855 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 PRINTS Kinesin heavy chain signature 953 970 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 MobiDBLite consensus disorder prediction 1109 1138 - -
Stsc90635g00036 1138 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 198 299 - -
Stsc90635g00036 1138 ProSiteProfiles FERM domain profile. 199 511 IPR000299 GO:0005856
Stsc90635g00036 1138 Gene3D - 1086 1134 - -
Stsc90635g00036 1138 PANTHER KINESIN-LIKE PROTEIN KLP-3 507 1121 IPR027640 GO:0003777|GO:0007018
Stsc90635g00036 1138 FunFam Kinesin-like calmodulin-binding protein 706 1085 - -
Stsc90635g00036 1138 Gene3D - 198 300 - -
Stsc90635g00036 1138 CDD KISc_C_terminal 760 1085 - -
Stsc90635g00036 1138 SUPERFAMILY Prismane protein-like 705 766 IPR011254 GO:0003824|GO:0016491
Stsc90635g00036 1138 Coils Coil 655 675 - -
Stsc90635g00036 1138 Pfam Kinesin motor domain 768 1083 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90635g00036 1138 Gene3D Kinesin motor domain 749 1085 IPR036961 -
Stsc90635g00036 1138 FunFam Kinesin-like calmodulin binding protein 300 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90635g00036 Stsc-Chr90635 257901 263547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90635g00036 1 1133 Calmodulin-binding Proteins AT5G65930 72.288 0.0 1727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90635g00036 - - gmx:100782701 1863.58