Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90635g00001 ATGCTGTTCAATGGACCGAGCTCCCCAGAACTTATCAGCAGAGAGACAAGGAGGTTCTCATTGGAGAGGCTAAGAAATGTTGGGAAAAGCGAAAAACGCATTGACCCTCCTGAGATAGCTGCTAGGAACTCGGCATCACATGCTTTAGGCAATCACAAGGTTAGGCAAAAGCAAACCGAAGATATGTGTGGAAATGGCACAAGCCATTGGCAAGTTTCAAAAGGGGAAAATGAAATACAAACAGGGTCTTTCAGGCATGATCCGGATGACAATGTGTTGTTCCAAAGGGACTTGTCCCCTAGAAACCTTGTAAGGTCCTTGTCTGCTCCTGTATCAATATCAGGAACATCGTTTGGGAAGCTGCTTTTAGAGGACCGCCACGTTTTAACTGGTGCACAAATTCGGAGGAAGCTTGAAGCTGTTGAAACTATTTCTGTTGACATTAAGAAACGGAAAAAGGATAGATTCAATATTAAAGAGAAAGTCTCCCATTTTAGATACAGCCTTGGTCTAAGAGGGAAGCTTTTCGGCAAAAGGATTCAATCAATGGTAGAATCACATGGCAGTGAATATGGTTCCATGGTGAGAGATGTCACCAGTGGACCGACAGTTCTATTGACTTATGGCGAGAGGCATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGAATTTTGGAAGCGAGCTGAATACTTAAGTCCATTATCAACTCCAGATGTTTCTTCGAGAGACGACAACAGTGTTCCCCTGGTTTTCAGAGATATCAGCTCTGGTTTGAGTGAGCTAAGGAGACAACTCAATCAACTCGAGTCCAATGGTTCCGATGACATCACAACAAAACAGGAACCTCTTGAGTCCGAGGTAGTTCAACTAGAGGATCCAGCAGAATCTGTTATAAGAGATCTACTGGTTGCCTCTGGTCTGTACTTCGGTTCATGGGATAAATCTTTATTAAGAGGAGACACAATAGCAAAGCCTATCAGCAACTTGGTATTCAAAGAAGTCGAAGCATCTCGCATGAAATCAACCAGCGAGAATGATGAAGATTCTATAAAGGATCGGAACGAGAATATGGTAAACAAGAAGGTTTTGGTTGATTTGTTGAACGAGGCACTTTCGGTTGTTCTTGGACCATCTCTTACATTATCAAGATTCAGAAGGAAATTAAGCAACACTTCCATGATGATGGCACCACCTCGCGGAAAAGAATTGTTGAAATCAGTGTGGGAAATCATCAGTGCTTCTTTGTATCCGCAATCCGATGAAATATATCCTTATTCTCTTGATGATTTGGTGGCTCAACATTTGGGTTCAATCCCTTGGTCTGGATTAGTATCAGAAGAGATCAATGTACTGGAAAGAGATATAGAATGCATGATAACCAATGATCTGGTTGAAGAACTCACAAAAGACATGCTCATTGGTCTTATCACCAAGAACTCGACTAACTCGACCTGA 1482 0.4265 MLFNGPSSPELISRETRRFSLERLRNVGKSEKRIDPPEIAARNSASHALGNHKVRQKQTEDMCGNGTSHWQVSKGENEIQTGSFRHDPDDNVLFQRDLSPRNLVRSLSAPVSISGTSFGKLLLEDRHVLTGAQIRRKLEAVETISVDIKKRKKDRFNIKEKVSHFRYSLGLRGKLFGKRIQSMVESHGSEYGSMVRDVTSGPTVLLTYGERHENSTEVPPSPASVCSSVHEEFWKRAEYLSPLSTPDVSSRDDNSVPLVFRDISSGLSELRRQLNQLESNGSDDITTKQEPLESEVVQLEDPAESVIRDLLVASGLYFGSWDKSLLRGDTIAKPISNLVFKEVEASRMKSTSENDEDSIKDRNENMVNKKVLVDLLNEALSVVLGPSLTLSRFRRKLSNTSMMMAPPRGKELLKSVWEIISASLYPQSDEIYPYSLDDLVAQHLGSIPWSGLVSEEINVLERDIECMITNDLVEELTKDMLIGLITKNSTNST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90635g00001 493 Coils Coil 260 280 - -
Stsc90635g00001 493 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 3 481 - -
Stsc90635g00001 493 MobiDBLite consensus disorder prediction 30 70 - -
Stsc90635g00001 493 Pfam Domain of unknown function (DUF4378) 307 475 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90635g00001 Stsc-Chr90635 4707 7467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90635g00001 4 480 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 45.859 9.00e-112 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90635g00001 - - adu:107487403 871.692