Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90633g00041 ATGAAAATAACATCTTATAATAACAATAACAATAACAATAATGATCACATCATCATCACCCATGATATACACTCACAAGTTTCACCCTACTTTTCCTCTTGGCAGAAATCTTTTGGGAAGGTATTCGTGTATTGGCTGGGCACAGAACCATTCTTGTACATTGCGGACGCAGAGTTGTTGAACAAAATCTCCAAGGAGGTGGCAGCTAAGAGATGGGGAAAGCCAAGTGTGTTTAGAAATGACAGAGATCCCATGTTTGGTAGTGGCTTGGTCATGGTTGAAGGCAACGATTGGGTTCGCCATCGCCACATTGTTGCACCCGCATTCAATCCCATCAATCTCAAGGCCATGGCTACCAACATCGTTGCTTCAACAAACAAAATGATACAAACATGGGTCTTCCAACATAACTCCGGCAACCCCGTAATCGACGTTGAGAGAGACATTGTAGCCACCGCCGGAGAGATCATAGCAATAACCACCCTCGGCGTGGGTGATCACAATGCCACAAATGTCTTCCAAAAATTGCGAGCTCTTCAGATCACACTCTTCAACACCAACCGCTACGTTGGGGTTCCATTCGGCAAGTACTTCAAGGTCATCAAAACCCTAGAGGCCAAGAATTTGGGTAAAGAAATTGACGAGCTCTTGTTGTCTATCATTGAAGCTCGCAAGAGCACCAAGGGTTCCCACCAGAGCGATTTGTTGGGTTTGTTGCTTCAAGAAAATGGCGATAAGAAGCTAACAATGAGGGAACTTGTTGATGAATGCAAGACATTCTTCTTTGGTGGCCATGAAACCACGGCACTCTCTATCACGTGGACTTTGCTGCTTCTGGCTATGCATCAAGATTGGCAGAACCAACTCAGAGATGAGATTCAACAAATGAAGTGGGTGATGAATGAAGCCCTAAGGCTGTACCCTCCCTCACCGAATGTGCAAAGGCAAGCAAGAGACGACATTCAAATTGATGGTTTGACTGTGCCTAAAGGAACCAACATGTGGATCGATGTGGTGGGGATGCACCATGACAAAGAGCTGTGGGGAGAGGATGCCAATGAGTTCAAGCCGGAGAGATTCATGGAGGATGTGAATGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACTTTCATGGAGTACAAGATTGTGTTGACACTCCTTCTCTCTAAATTCTCTTTCAAACTTTCTCCTTCTTACCATCACTCACCTTCTATCATGCTCTCTCTAAGGCCCACCCATGGACTCCCACTCATTGTTCAACCACTTTAG 1311 0.4523 MKITSYNNNNNNNNDHIIITHDIHSQVSPYFSSWQKSFGKVFVYWLGTEPFLYIADAELLNKISKEVAAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMATNIVASTNKMIQTWVFQHNSGNPVIDVERDIVATAGEIIAITTLGVGDHNATNVFQKLRALQITLFNTNRYVGVPFGKYFKVIKTLEAKNLGKEIDELLLSIIEARKSTKGSHQSDLLGLLLQENGDKKLTMRELVDECKTFFFGGHETTALSITWTLLLLAMHQDWQNQLRDEIQQMKWVMNEALRLYPPSPNVQRQARDDIQIDGLTVPKGTNMWIDVVGMHHDKELWGEDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSKFSFKLSPSYHHSPSIMLSLRPTHGLPLIVQPL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90633g00041 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 377 386 IPR017972 GO:0005506|GO:0016705
Stsc90633g00041 436 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 428 - -
Stsc90633g00041 436 SUPERFAMILY Cytochrome P450 23 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 Gene3D Cytochrome P450 16 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 Pfam Cytochrome P450 26 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS E-class P450 group I signature 35 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS E-class P450 group I signature 338 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS E-class P450 group I signature 252 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS E-class P450 group I signature 374 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS E-class P450 group I signature 384 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS E-class P450 group I signature 272 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS P450 superfamily signature 375 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00041 436 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90633g00041 Stsc-Chr90633 273963 275567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90633g00041 11 436 Cytochrome P450 AT5G52400 58.744 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90633g00041 - - gmx:100785284 669.463