Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90633g00040 ATGTCTAGCGAGGTAATGGCGAAGAGATGGGGAAAACCAAGTGTGTTTAGAAATGACAGAGATCCCATGTTTGGTAGTGGCTTGGTCATGGTTGAAGGCAACGATTGGGTTCGCCATCGTCACATTGTTGCACCTGCATTCAATCCCATCAATCTCAAGGCTATGGCAAGCGTAATGAGTGAGTCCACCAATGAAATGATATGTGGATGGAGCAACCAAATTAAGATGGGAAAACCCCAAATCGACGTTGAGACTGAGATCATAACCCTCGCCGGAGACATCATCGCCAGAACTATCTTCGGCCTCAAAGACCACTCCGCTAGAGATGTTTTCCACAAGCTCAGAGCCCTTCAAATGACTCTCTTCAACACCAATCGCTACGTCGGTGTTCCATTCGGCAAGTACTTCAAGGTCAAGAAAACCCTAGAGGCCAAGAAGTTAGGCAAAGAAATCGACCACCTCTTGCTCTCTATCATTCAAGCTCGCAAGAACTCTCCCAATAACAAGGATTCTCAGAGTGATTTGCTGGGTTTGTTGCTCCAACAAAATAATCATCATGGTAAGGCTCTTACAATGAGGGAGCTTCTTGATGAATGCAAGACCTTCTTCTTTGGCGGACATGAAACCACGGCACTCTCTATCACGTGGACTTTGCTGCTTCTGGCTATGCATCAAGATTGGCAGAACCAACTCAGAGATGAGATTCAACAAGTTCTTGCTCAACACAACCACGTTATTCATCTCGCCATGCTTTCTGGCTTAACCAAGATGAAATGGGTGATGAATGAAGCTCTAAGGCTGTACCCTCCCTCACCAAATGTGCAAAGGCAAGCAAGAGACGACATTCAAATTGATGGTTTGACTGTGCCTAAAGGAACCAACTTGTGGATCGATGTGGTGGGGATGCACCATGACAAAGAGCTGTGGGGAGAGGATGCCAATGAGTTCAAGCCGGAGAGATTCATGGAGGATGTGAATGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACTTTCATGGAGTACAAGATTGTGTTGACACTCCTTCTCTCTAAATTCTCTTTCAAACTTTCTCCTTCTTACCATCACTCACCCTCTATCATGCTCTCTCTAAGGCCTACCCATGGACTCCCACTCATTGTTCAACCCCTTTAG 1194 0.459 MSSEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMASVMSESTNEMICGWSNQIKMGKPQIDVETEIITLAGDIIARTIFGLKDHSARDVFHKLRALQMTLFNTNRYVGVPFGKYFKVKKTLEAKKLGKEIDHLLLSIIQARKNSPNNKDSQSDLLGLLLQQNNHHGKALTMRELLDECKTFFFGGHETTALSITWTLLLLAMHQDWQNQLRDEIQQVLAQHNHVIHLAMLSGLTKMKWVMNEALRLYPPSPNVQRQARDDIQIDGLTVPKGTNLWIDVVGMHHDKELWGEDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSKFSFKLSPSYHHSPSIMLSLRPTHGLPLIVQPL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90633g00040 397 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 338 347 IPR017972 GO:0005506|GO:0016705
Stsc90633g00040 397 PRINTS P450 superfamily signature 205 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS P450 superfamily signature 336 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS P450 superfamily signature 259 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 SUPERFAMILY Cytochrome P450 11 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 Gene3D Cytochrome P450 1 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 Pfam Cytochrome P450 11 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS E-class P450 group I signature 194 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS E-class P450 group I signature 214 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS E-class P450 group I signature 345 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS E-class P450 group I signature 299 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PRINTS E-class P450 group I signature 335 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00040 397 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90633g00040 Stsc-Chr90633 267449 269627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90633g00040 1 397 Cytochrome P450 AT5G52400 59.548 6.94e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90633g00040 - - gmx:100785284 624.394