Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90633g00039 ATGACATTCACTCCACCGTCTTTCCCCACTTTTCTCGTTGGCAAAATTCATACGGAATTTACAGGGAAAGTGTTCATCTACTGGCTGGGAACAGAGCCATTCTTGTACATTGCAGAGCCAGAGTTGGTGAAGAAAATGTCTACACATGTTATGGCCAAGTGCTGGGGAAAACCTAATGTCTTTAAAGATGACAGATATCCCATGTTTGGGACCGGCTTGGTTATGGCGGAGGGCCATCATTGGGTGCGCCACCGCCATCTCATCGCCCCTGCCTTTTCACCACTCAACTTGAAGAGCGTTGCAAGCAGGATGGTGGATTGTGCAAATGAAATGATAATGAGGTGGTCTACTCAAATTAATAACTCTGCTGCTGCTGCTGCTGGTGGCAATGGCGTAATAATTGACGTTGAAAAAGAGATTATAGAGACCAGCGGAGAGATCATAGCTAAGACATGCTTTGGAGGCACGCAAGATGAAGATGCTAAGCAAGTGCTTCAAAAATTACGAGCCTTACAAACAGCACTTTTTAAGAGCACCCGCTACGTGGGGGTTCCCTTTGGCAGGTTCTTCAACGTGAAGAAAACTTTAGAGGCCAACAAACTTGGAGCAGAAATCGACAGGCTCTTGTTTTCTGTGATAAGGGCTCGGAAAGAATCAAAGAATGATGATGGAATAGATTTATTAGGGTTGTTGATGAATGGAGGAGGAGGAGGAGGAGGAGGAGGAGTTGGTAATGATGTATTAACAGAAAGAGAGGTTGTGGATGAGTGCAAGACGTTCTTCTTCGGAGGGCATGAGACAACAGCATTGGCCATAACTTGGACTCTGATGCTTCTGGCTTTGCATCCACATTGGCAAATCCAATTGAGACATGAAATTTTTCAACTTCTTCCTCATCATAATAACAACCCATTTCTTCATATCAATCTTCTTTCTCGCCTCAAAAAGATGCAATGGGTAATGAATGAAGCCCTAAGACTATACCCACCAGCACCGAATGTGCAAAGGCAAGCAAGGGAAGACATTCAAATTGAGGGATTAATGGTGCCTAAAGGAACCAACATGTGGATCGATGTGGTGGCCATGCACCATGACAAAGAGCTTTGGGGAGAGGATGCTAATGAGTTCAAGCCGGAGAGATTCATGGAAGATGTGAATGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGACTTTCATGGAGTACAAGATTGTGTTGACACTTGTTCTCTCCAAATTCTCTTTCAAACTTTCTACTTCTTACCATCATTCACCATCTATCATGCTCTCTCTAAGGCCCTCCCATGGACTCCCACTCGTAGTTCAACCACTTTAA 1374 0.444 MTFTPPSFPTFLVGKIHTEFTGKVFIYWLGTEPFLYIAEPELVKKMSTHVMAKCWGKPNVFKDDRYPMFGTGLVMAEGHHWVRHRHLIAPAFSPLNLKSVASRMVDCANEMIMRWSTQINNSAAAAAGGNGVIIDVEKEIIETSGEIIAKTCFGGTQDEDAKQVLQKLRALQTALFKSTRYVGVPFGRFFNVKKTLEANKLGAEIDRLLFSVIRARKESKNDDGIDLLGLLMNGGGGGGGGGVGNDVLTEREVVDECKTFFFGGHETTALAITWTLMLLALHPHWQIQLRHEIFQLLPHHNNNPFLHINLLSRLKKMQWVMNEALRLYPPAPNVQRQAREDIQIEGLMVPKGTNMWIDVVAMHHDKELWGEDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLVLSKFSFKLSTSYHHSPSIMLSLRPSHGLPLVVQPL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90633g00039 457 PRINTS E-class P450 group I signature 272 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS E-class P450 group I signature 252 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS E-class P450 group I signature 18 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
Stsc90633g00039 457 Pfam Cytochrome P450 18 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 Gene3D Cytochrome P450 4 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 SUPERFAMILY Cytochrome P450 19 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90633g00039 457 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90633g00039 Stsc-Chr90633 261672 264480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90633g00039 22 457 Cytochrome P450 AT5G52400 58.998 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90633g00039 - - gmx:100785284 601.282