Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90632g00036 ATGGTGGGGATGAGGAAGCAATTTGGAAGTTGTTGTGGGACAACATCATCAACATCAACAACAACAACCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGGAGGTGTGCTGAGGAATGCCCTTTCTCTCCATACTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTCGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGGCAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCTGTTTATGGATGCATGGGTGCAATTTCAAGCTTGCAGCAACACATTCAGATATTGCAAGCTGAACTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCTGCCACTGCCACTCTCATTGAAATGAATCATCATCATCTTCCACCTAATAATAATCAAGCACCAACAATAATCAACAATAATAATGATAATAATAATACTGCAAACTCTTCTTCATCACAACAACAAGGTGTTTCTCATCAACCTCCTCCTCTGCAGCAGTCGCGCCACGCGCCACCGAATAATAATCCATCATTGCCTTCTCCTTCTATTGTTGTACTTTCATCGTCGTCTTTGTCGTCGTCTTCTTCTTCGGTTTCTTCCTCGGTTTACAACAACACTACTACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAGAGTGTTCCTTATTTTGCCTAA 765 0.4209 MVGMRKQFGSCCGTTSSTSTTTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISSLQQHIQILQAELNAVRAEILKYKYREAAAATATLIEMNHHHLPPNNNQAPTIINNNNDNNNTANSSSSQQQGVSHQPPPLQQSRHAPPNNNPSLPSPSIVVLSSSSLSSSSSSVSSSVYNNTTTPPKTTLSHGSITSESVPYFA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90632g00036 254 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90632g00036 254 Coils Coil 108 135 - -
Stsc90632g00036 254 MobiDBLite consensus disorder prediction 205 248 - -
Stsc90632g00036 254 MobiDBLite consensus disorder prediction 149 254 - -
Stsc90632g00036 254 Pfam Lateral organ boundaries (LOB) domain 29 126 IPR004883 -
Stsc90632g00036 254 ProSiteProfiles LOB domain profile. 28 129 IPR004883 -
Stsc90632g00036 254 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 184 - -
Stsc90632g00036 254 MobiDBLite consensus disorder prediction 150 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90632g00036 Stsc-Chr90632 280957 282574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90632g00036 22 142 AS2 family AT2G30340 84.298 8.10e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc90632g00036 LOB 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90632g00036 - - adu:107458169 283.878