Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90632g00035 ATGTTTGGATGTCCTGAGACAGAAAGAATAGAGGAGATAGCAAAGAAGGTGAAGATAGAAGCAGAATTATCATCAAGTTGTTGTGAAAGTAGTGAACAACAAAAAATAATGGTGGGGATGAGGAAGCAATTTGGAAGTTGTTGTGGGACAACATCATCAACATCAACAACAACAACCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGGAGGTGTGCTGAGGAATGCCCTTTCTCTCCATACTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTCGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGGCAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCTGTTTATGGATGCATGGGTGCAATTTCAAGCTTGCAGCAACACATTCAGATATTGCAAGCTGAACTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCTGCCACTGCCACTCTCATTGAAATGAATCATCATCATCTTCCACCTAATAATAATCAAGCACCAACAATAATCAACAATAATAATGATAATAATAATACTGCAAACTCTTCTTCATCACAACAACAAGGTGTTTCTCATCAACCTCCTCCTCTGCAGCAGTCGCGCCACGCGCCACCGAATAATAATCCATCATTGCCTTCTCCTTCTATTGTTGTACTTTCATCGTCGTCTTTGTCGTCGTCTTCTTCTTCGGTTTCTTCCTCGGTTTACAACAACACTACTACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAGAGTGTTCCTTATTTTGCCTAA 873 0.4112 MFGCPETERIEEIAKKVKIEAELSSSCCESSEQQKIMVGMRKQFGSCCGTTSSTSTTTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISSLQQHIQILQAELNAVRAEILKYKYREAAAATATLIEMNHHHLPPNNNQAPTIINNNNDNNNTANSSSSQQQGVSHQPPPLQQSRHAPPNNNPSLPSPSIVVLSSSSLSSSSSSVSSSVYNNTTTPPKTTLSHGSITSESVPYFA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90632g00035 290 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 61 220 - -
Stsc90632g00035 290 ProSiteProfiles LOB domain profile. 64 165 IPR004883 -
Stsc90632g00035 290 MobiDBLite consensus disorder prediction 241 284 - -
Stsc90632g00035 290 Coils Coil 144 171 - -
Stsc90632g00035 290 MobiDBLite consensus disorder prediction 185 290 - -
Stsc90632g00035 290 Pfam Lateral organ boundaries (LOB) domain 65 162 IPR004883 -
Stsc90632g00035 290 MobiDBLite consensus disorder prediction 186 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90632g00035 Stsc-Chr90632 280923 282635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90632g00035 12 178 AS2 family AT2G30340 66.467 1.51e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc90632g00035 LOB 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90632g00035 - - adu:107458169 306.219