Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90632g00021 ATGATGCCAGAGATCGAACAAGCGCCGCCACACACGGCGACCGCAGCTACCACCACCTCCTCCTCCGCCGCCTCCACCTCCGCCTCCGCCTCCACCATCTCCGTCAGCAACGCCTTATTCGGAAAATACGAGCTAGGAAGACTCCTAGGATGCGGTGCGTTCGCGAAGGTCTACTACGCGCGAAACGTGAGAACGATGCAGAGCGTGGCGATTAAGGTGATAAGCAAGAAGAAGATAATGGGAACGTCGCTGGTTTCGAACGTGAAGCGCGAGGTTTCGATCATGAGCAAGCTGAACCACCCGAACATCGTGAAGCTGCACGAGGTGCTGGCGACGAAGACGAAGATCTATTTCGTGTTGGAGTTCGTCAAAGGCGGTGAGCTATTTGCCAAGGTTTCCAAAGGCAGGTTCAGCGAGGATCTCAGCCGCAAGTATTTCCAGCAGCTTATCTCCGCCGTAGGGTACTGTCACTCGCGCGGCGTTTTCCACCGTGATTTGAAGCCGGAGAATCTCTTGCTTGATGAGAGTGGGAATCTTAAGGTCTCCGATTTTGGACTCAGTGCTGTCAAAGACCAGGTCAGGTTTGATGGGTTGTTGCACACGTTGTGTGGCACTCCAGCATATGTGGCACCGGAGATTCTGGCAAAGAAGGGCTATGACGGTGCAAAGGTTGATGTATGGTCTTGTGGGGTGATTCTCTTTGTCCTTGCAGCAGGGTACCTACCTTTCAATGATCCAAACTTGATGGTGATGTACAAGAAGATCTACAAGGGGGAGTACAGGTGTCCACGGTGGATGTCGCCGGATCTACGACGGTTCCTTTCGAGGGTGCTTGATACCAACCCTGAGACAAGGTTCACCGTTGACGAGATCACCAGGGACCCTTGGTTTAGAAAAGGCTACAAGGATATGAAGTTCCATGAGGATTGGAATCTTGGGTCCAAACTTGATGCCGAGGACAAGGTGAAGGAATTGAATGCTTTTGATATTATCTCATTCTCTTCAGGTTTGAATCTTTCTGGATTGTTTGTTGGTGGTGGCGCCTCCACATCGACGACTGTAGAGGACAGCGAGAGGCTCATGCTCAGAGGTTCAGTTGAGGGGATTGTGGCTAGGGTGGAAGAGGTGGCTGTGACAGAGGGGCTCTTAGCAAGAGGGATGAAAGAATGTGGTGTGGAGCTAGAGGGGCAAAATGGTAATTTTGGGTTTGTGGCGGAGGTTTGCCGGGTGACGGCCGACCTGGTTGTGGTGGAGGCAACAAGGAAAACCGGGGATCCGTTTGCATTTCGGGATATGTGGAGGAACAAATTGACACCTCAGCTATTAAGTACTGCTACAACAAAAAGTTATAGCAGTACCGATTTAGCTGAGGCTGATCAATCGGAGGAGATTTCCGAGTCCCAGCAGATTGCTAGTGACTGA 1422 0.5155 MMPEIEQAPPHTATAATTTSSSAASTSASASTISVSNALFGKYELGRLLGCGAFAKVYYARNVRTMQSVAIKVISKKKIMGTSLVSNVKREVSIMSKLNHPNIVKLHEVLATKTKIYFVLEFVKGGELFAKVSKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDESGNLKVSDFGLSAVKDQVRFDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLAAGYLPFNDPNLMVMYKKIYKGEYRCPRWMSPDLRRFLSRVLDTNPETRFTVDEITRDPWFRKGYKDMKFHEDWNLGSKLDAEDKVKELNAFDIISFSSGLNLSGLFVGGGASTSTTVEDSERLMLRGSVEGIVARVEEVAVTEGLLARGMKECGVELEGQNGNFGFVAEVCRVTADLVVVEATRKTGDPFAFRDMWRNKLTPQLLSTATTKSYSSTDLAEADQSEEISESQQIASD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90632g00021 473 Gene3D Kinase associated domain 1, KA1 321 445 - -
Stsc90632g00021 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Stsc90632g00021 473 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 32 421 - -
Stsc90632g00021 473 CDD CIPK_C 326 441 - -
Stsc90632g00021 473 ProSiteProfiles Protein kinase domain profile. 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90632g00021 473 Pfam NAF domain 323 382 IPR004041 GO:0007165
Stsc90632g00021 473 Pfam Protein kinase domain 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90632g00021 473 SUPERFAMILY Protein kinase-like (PK-like) 40 309 IPR011009 -
Stsc90632g00021 473 MobiDBLite consensus disorder prediction 448 473 - -
Stsc90632g00021 473 MobiDBLite consensus disorder prediction 1 21 - -
Stsc90632g00021 473 FunFam Non-specific serine/threonine protein kinase 34 327 - -
Stsc90632g00021 473 FunFam Non-specific serine/threonine protein kinase 34 122 - -
Stsc90632g00021 473 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Stsc90632g00021 473 SMART serkin_6 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90632g00021 473 Gene3D Transferase(Phosphotransferase) domain 1 123 304 - -
Stsc90632g00021 473 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
Stsc90632g00021 473 Gene3D Phosphorylase Kinase; domain 1 32 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90632g00021 Stsc-Chr90632 166104 168969 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90632g00021 36 453 CBL-interacting serine-threonine protein kinases AT2G30360 63.915 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc90632g00021 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90632g00021 - - tcc:18591074 585.104