Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90632g00006 ATGGGCAATAACAAGTTCAGATTTTCAGATATGATACCAAATGCTTGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAGAAATGGGTCTCATCATCATCATAATCATGTTTTGAAGAACAAGAGCAATAGCAAGGTTACTTCACCAACAGCATCACAAAGGTCGCATCCAAGGTGTTCGAATTATTTACCCAATGAACCTTTTATAAGAGCTGGTAAGTTGTATGACACAAAAATTCACAACAGCAAAGACTTTTTTGGTGGAAACATTCCATTTCCATTCACTGATTCTTCTTCACCAAGAATGTCATCATCAAAGAGAAGGTCTAGGAGAAAAACCATTTACAAGCCTTCTCCAACTGTTGTTGTTTCTTCTTCTAATTCAACTTTCATGGCCAATTCTAACTTTGATTCAGCACACAACAATCTTCAGTCACCAGATTATGATGCTTCTTCGGTGGAAAGCTCTTCTGGATCTGATGATGATTTCAATGAATATGTGTACTCTGAGTCTGAATGTGATAGCTTTTCGGTTCCGGATTTGCTTAATGGTATAGACTCCAATTGCAGTTGCAGGGTTAGTTCTTCAACAAATGACATCATAATTGACATGAACAATGAACATTTCAAGGGGAACATGGGTAAGAAAGATGGGCTTGAGACGATTTCGCAATTAGGCCTTGCTCCTATAATGACAAAGTCAGAGAGGTTTGATGATAAGGTCATTGAATTCGAAGCTGCCGAGTTCAGGAGAAGTTCATCTGAGTTTGATGATGAGCTGCAGGGTGATGAGTCTCTTAATGCCAAATCCAGCATAGAGGAAATCAATGGCAGAGCACATAGGCGGCGAAAAAGTGGTCATATATCTCGCCGGCCGCCTACTAACTCTCCAACCGGGATAAGGCTAAGAGTCAATTCTTCAAAACTAGCTAGCAGAAAGATTCAAGCCTATGCAAGAAAGAGTGTTTCTTCCAATGGAAGCAAGGCTTCAAGGAATGCAGGGTTTCCGGATGGATTCGCCGTGGTTAAGTCCTCGTTTGATCCACAAAGTGACTTTCGGGATTCAATGTTGGAGATGATCATCGAGAACAATATCCGTGCGTCAAAGGATCTGGAGGACTTGCTTGCCTGCTACCTCTCCCTGAATTCAACTGAATTCCATGATCTCATTGTTAAAGCATTTGAGCAGATTTGGTTTGAGTTTGCTCAACTTAGAATGTAA 1227 0.4051 MGNNKFRFSDMIPNAWFYKLKDMSKSRKRNGSHHHHNHVLKNKSNSKVTSPTASQRSHPRCSNYLPNEPFIRAGKLYDTKIHNSKDFFGGNIPFPFTDSSSPRMSSSKRRSRRKTIYKPSPTVVVSSSNSTFMANSNFDSAHNNLQSPDYDASSVESSSGSDDDFNEYVYSESECDSFSVPDLLNGIDSNCSCRVSSSTNDIIIDMNNEHFKGNMGKKDGLETISQLGLAPIMTKSERFDDKVIEFEAAEFRRSSSEFDDELQGDESLNAKSSIEEINGRAHRRRKSGHISRRPPTNSPTGIRLRVNSSKLASRKIQAYARKSVSSNGSKASRNAGFPDGFAVVKSSFDPQSDFRDSMLEMIIENNIRASKDLEDLLACYLSLNSTEFHDLIVKAFEQIWFEFAQLRM 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90632g00006 408 MobiDBLite consensus disorder prediction 27 42 - -
Stsc90632g00006 408 Pfam Transcriptional repressor, ovate 347 402 IPR006458 -
Stsc90632g00006 408 MobiDBLite consensus disorder prediction 43 62 - -
Stsc90632g00006 408 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
Stsc90632g00006 408 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 68 403 IPR038933 GO:0045892
Stsc90632g00006 408 MobiDBLite consensus disorder prediction 27 66 - -
Stsc90632g00006 408 MobiDBLite consensus disorder prediction 255 303 - -
Stsc90632g00006 408 ProSiteProfiles OVATE domain profile. 343 402 IPR006458 -
Stsc90632g00006 408 MobiDBLite consensus disorder prediction 143 163 - -
Stsc90632g00006 408 NCBIfam uncharacterized plant-specific domain TIGR01568 341 403 IPR006458 -
Stsc90632g00006 408 MobiDBLite consensus disorder prediction 99 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90632g00006 Stsc-Chr90632 54070 55373 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc90632g00006 Ovate 9.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90632g00006 - - adu:107458115 614.379