Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90632g00002 ATGGAAGATGGAAGAGAAGAACATAGTTATGTTGAAACCGACCCAACAGGTCGATATGGCAGGTTTGCAGAAATTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAAGTTCTTGGGATAGAGGTAGCATGGAATCAGGTGAAGATCAACGAGGCGCTTCGCACGCCGGACGATTTGCAGCGGCTATACTCGGAGGTTCATCTTCTAAGCACCCTCAAGCACCCATCCATCATAAGATTCTATACTTCTTGGATTGATGTAGAGAGCAAGGCCTTCAACTTTGTCACTGAAATGTTCACTTCAGGATCACTAAGAGAGTACCGGAAAAAATATAAGCGAGTCAACATAGGAGCGATAAAGAATTGGTGTCGGCAAATCTTAGAGGGTCTTGTTTATCTCCACGGCCACGATCCGCCGGTGATCCACAGGGACCTAAAATGTGACAACATATTTGTCAATGGCCACCTTGGACAAGTGAAAATTGGAGACCTTGGGCTAGCTGCAATCCTTCGCGGCACGCCGGAGTTCATGGCACCGGAGTTGTATGAGGAAGATTACAACGAACTTGTTGATGTGTACTCATTTGGAATGTGTTTACTGGAAATGCTTACATCTGATTATCCATATTGTGAATGTACTAATCCAGCACAGATATACAAGAAAGTAACATCGGGGAAGTTACCGATGGCATTCTTCCGAGTTGAAGACGCCGAAGCGCAGAGGTTCATCGGAAGATGCCTGCTGCCGGCCGCAAAGAGACCATCAGCAAGAGACTTGTTGAATGACCCTTTCTTTGTGTCTCTTGATTCTTCATCATCATCATCGTTAACAAAGTTTGGAATTCAGAACTATTCACTTGTGAATAGTGAGATAGAAAAGCTACAATTGAGTGATGCTTTGCCTAGAACTGAAATGAAAATCATTGGCAAGCTTAATCCTGATGATACCATCTTTCTCAAAGTCCAACTTTCTGATAAAGATGGGTCTGTGAGGAATGTATATTTTCCGTTTGACATTGTGAGTGATACTCCCATTGATGTTGCGACGGAGATGGTGAAGGAATTAGAGATTGGTGATTGGGAGCCTTTTGAAATTGCGAATATGATCGATGGTGAAGTCTCTGCTCTGCTACCACACCGGAAGCAGATGAGTAATCATGACGAATTCGACGATGACGACGGAGGATCTCATCATCATTTTCGGTCCTTCTCTTCTTGCTCCTCCTCCCAAGAATCAATGGCAGGTCTATTTCCAAAATCTGAGGGCATGCATAATGAATATTACTGGCTCCATGATGATTTTGTTGACGACACGAGTTCACAAGGGACGTATTCCAACCTGAACTATCATTCAGCAGATGAACTTGACTATGTCTATAATAATAATAATAATAATAATATAGCTTCTTGTACCAAAAGAGACAAAATTCCGATCATAAAGAGTCACACTCACAAGTCCTCAACACAACTAGCACCTTGTAGTAGTAGCCTCAAAGGAAAGAGGGTGGTGGAGAATGGTAATAGTAGTAGTAGTAGTAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAATTGTTGCACAGATCATTGGTTGAGGAAGTTCACAAGAGAAGGTTGTCTAAAACTGTTGGTGCTGTTGAGAATATTGGATTCCAAGCACCTTGTGGAGTTGTTGACAATAATGATAAGAGCCATTCAAGGAGTAGTGCCAAGGGAGAAAAAGTTGCCAAATAA 1752 0.4229 MEDGREEHSYVETDPTGRYGRFAEILGKGAMKTVYKAIDEVLGIEVAWNQVKINEALRTPDDLQRLYSEVHLLSTLKHPSIIRFYTSWIDVESKAFNFVTEMFTSGSLREYRKKYKRVNIGAIKNWCRQILEGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGTPEFMAPELYEEDYNELVDVYSFGMCLLEMLTSDYPYCECTNPAQIYKKVTSGKLPMAFFRVEDAEAQRFIGRCLLPAAKRPSARDLLNDPFFVSLDSSSSSSLTKFGIQNYSLVNSEIEKLQLSDALPRTEMKIIGKLNPDDTIFLKVQLSDKDGSVRNVYFPFDIVSDTPIDVATEMVKELEIGDWEPFEIANMIDGEVSALLPHRKQMSNHDEFDDDDGGSHHHFRSFSSCSSSQESMAGLFPKSEGMHNEYYWLHDDFVDDTSSQGTYSNLNYHSADELDYVYNNNNNNNIASCTKRDKIPIIKSHTHKSSTQLAPCSSSLKGKRVVENGNSSSSSRLTRNRSLIDIRSQLLHRSLVEEVHKRRLSKTVGAVENIGFQAPCGVVDNNDKSHSRSSAKGEKVAK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90632g00002 583 ProSiteProfiles Protein kinase domain profile. 20 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90632g00002 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Stsc90632g00002 583 CDD STKc_WNK 18 269 - -
Stsc90632g00002 583 MobiDBLite consensus disorder prediction 562 583 - -
Stsc90632g00002 583 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 540 - -
Stsc90632g00002 583 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Stsc90632g00002 583 MobiDBLite consensus disorder prediction 491 518 - -
Stsc90632g00002 583 FunFam probable serine/threonine-protein kinase WNK9 103 274 - -
Stsc90632g00002 583 MobiDBLite consensus disorder prediction 388 408 - -
Stsc90632g00002 583 Pfam Protein kinase domain 24 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90632g00002 583 MobiDBLite consensus disorder prediction 388 403 - -
Stsc90632g00002 583 SMART serkin_6 20 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90632g00002 583 SUPERFAMILY Protein kinase-like (PK-like) 22 270 IPR011009 -
Stsc90632g00002 583 Gene3D Transferase(Phosphotransferase) domain 1 103 275 - -
Stsc90632g00002 583 FunFam Probable serine/threonine-protein kinase WNK1 5 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90632g00002 Stsc-Chr90632 12781 17439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90632g00002 10 563 MAP Kinase Kinase Kinase AT5G58350 56.604 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc90632g00002 Pkinase 4.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90632g00002 K08867 - gmx:100272203 772.696