Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90631g00048 ATGAAGCTCCTTAGAGAAGCTGGAGTTCCTGAATCAAAACTTGTTAGGTTAATAGAGAGTTTCCCCACACAACTTAAGAATAGTCCTAAGGTGTTTAAGGAGGCATTGAGGGAAGTTAAGGAGATGAAGTTTGATCCCTTGAAGCTTCAATTTATTTTGGCTATTCATGTGAAGCTGTATGTAGGAAAACCCACATGGGAAAGAAGGGAAGGTATTTATAGAAAATGGGGTTGGAGCGACGGCAATGTTGTCACGGCTTTCAGACGCTATCCGTTGTGCTTCCTCACCGCGGACGAGAAGATCGAAGCAGTCATGGATTTTCTGGTGAATCAACTGGGTTATGCATCTTCTTGTGTTGCTAAGTGTCCTGTGGTGTTGAATATGAGTTTGAAAAGGAGAATCATTCCAAGGGGTTCTGTTTTTCTGTTTTTGCAGTCTAAGGGTCTGGTGAGGAATCTGGGCTTGACTGCAATATTTAAAATTGATGAAAAGACCTTCTTGAGAAGGTTCATCTTTTTGCAGGAAGAAAGAAGCTGA 537 0.4171 MKLLREAGVPESKLVRLIESFPTQLKNSPKVFKEALREVKEMKFDPLKLQFILAIHVKLYVGKPTWERREGIYRKWGWSDGNVVTAFRRYPLCFLTADEKIEAVMDFLVNQLGYASSCVAKCPVVLNMSLKRRIIPRGSVFLFLQSKGLVRNLGLTAIFKIDEKTFLRRFIFLQEERS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90631g00048 178 Pfam mTERF 2 166 IPR003690 GO:0003690|GO:0006355
Stsc90631g00048 178 PANTHER CGI-12 PROTEIN-RELATED 2 172 IPR003690 GO:0003690|GO:0006355
Stsc90631g00048 178 SMART mt_12 15 45 IPR003690 GO:0003690|GO:0006355
Stsc90631g00048 178 SMART mt_12 84 115 IPR003690 GO:0003690|GO:0006355
Stsc90631g00048 178 SMART mt_12 116 150 IPR003690 GO:0003690|GO:0006355
Stsc90631g00048 178 Gene3D Transcription termination factor 3, mitochondrial 1 177 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90631g00048 Stsc-Chr90631 307921 309284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc90631g00048 mTERF 1.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90631g00048 K15031 - qsa:O6P43_003532 161.77