Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90630g00024 ATGCCCTTGGAAGGAGGGATTTTCATTGAATCATCTACTTCTGCTTCTGCTTCTTCAATTCTTCCTGATCTTTCCCTTCACATAAGCCCTCCAACAACCACCACCACTTCTGCCGGAGGAGGACCCACCTTCTTCCACAATAAACCACATCATCACACCGACCTCTCTCTTGGAACAGGACAACCACCACCACCGCCACCGCTACCTCCACCGCCGCACCATTTCAACTACGGCGTTAACGTTTCATCATCAGAAGCAGCATCCTCGTTGACACCCATAAAAGGGATCCCAGTTTATCACAACCGTTCTTTCCCTTTCTTACCGACCACCATGGATAGGGATCATCATCACATGCCTACTGCTTCTGCTTCTTCATCTTCTCCTTTCCCAGTGGGAGTGGGTTTAGATCCCATTTCCTTCTTGAATTCAAGCTCCATGGGAGGGCCTTATTATAATAATAGGGGTGCTGCCACAAGGTTCATCAATAATAGTAGTGAGGGTTTCAATAAATCCCAGCATCATCATCATCCATTGCACCCACACTACTCAGAGATGAGATCAAGGTTCTTGCCCAAGCTTGCAACCAAGAGGAGCATGAGAGCCCCTAGGATGCGGTGGACCAGCACCCTCCATGCTCGATTTGTTCACGCCGTTGAGCTTCTTGGCGGACATGAAAGAGCAACACCAAAGTCAGTTCTTGAGCTCATGGATGTCAAAGATCTCACATTAGCCCATGTCAAAAGTCATTTGCAGATGTATCGAACTGTTAAGACTACTGACAAGCCTGCACCTTCTTCAGGGCTTTCAGATGGATCAGGAGAGGATGAAATGTCTCCTACAATGGGAAACAATGGTAGTATGCGTCAACTTCAAGAGCAAAGAGGCCAACAAGATCGGACACTTCAACAAGATATGGATTATTCTTCTTCCACCCCAACACTATGGAGTAATAATTCTTCAAGTAGGGACCCATGGCCACAAGCTAGTAGTTCAAACGACATAGATGGTTTCAGAGCTCTACCAATGTTTCAGTCACAATCCTTAGGCCATCAAATTCAGGAGTGTGATTCAACCCAACTCAAGAACAGTTTGTCAGGATCTAACATTAATTTAGAGTGCAAGAATCCAAGTTTGGAGTTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1182 0.4602 MPLEGGIFIESSTSASASSILPDLSLHISPPTTTTTSAGGGPTFFHNKPHHHTDLSLGTGQPPPPPPLPPPPHHFNYGVNVSSSEAASSLTPIKGIPVYHNRSFPFLPTTMDRDHHHMPTASASSSSPFPVGVGLDPISFLNSSSMGGPYYNNRGAATRFINNSSEGFNKSQHHHHPLHPHYSEMRSRFLPKLATKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAPSSGLSDGSGEDEMSPTMGNNGSMRQLQEQRGQQDRTLQQDMDYSSSTPTLWSNNSSSRDPWPQASSSNDIDGFRALPMFQSQSLGHQIQECDSTQLKNSLSGSNINLECKNPSLEFTLGRPDWNGKGQA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90630g00024 393 Gene3D - 201 258 - -
Stsc90630g00024 393 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 22 390 IPR044847 GO:0000976|GO:0006355|GO:0010158
Stsc90630g00024 393 MobiDBLite consensus disorder prediction 59 74 - -
Stsc90630g00024 393 MobiDBLite consensus disorder prediction 31 79 - -
Stsc90630g00024 393 MobiDBLite consensus disorder prediction 255 334 - -
Stsc90630g00024 393 NCBIfam myb-like DNA-binding domain, SHAQKYF class 202 255 IPR006447 GO:0003677
Stsc90630g00024 393 FunFam Myb family transcription factor 200 258 - -
Stsc90630g00024 393 SUPERFAMILY Homeodomain-like 199 255 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90630g00024 Stsc-Chr90630 141437 145298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90630g00024 1 390 G2-like Transcription Factor Family AT5G16560 44.907 3.28e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc90630g00024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90630g00024 - - adu:107481025 477.633