Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90630g00008 ATGTCAAAGGCAAATAATGTTATTCTGTTCGGATTCGGGGTAAGCCCATTTTGTGGGAGAGTGAAGGTTGCTTTGGCTGAGAAAGGTGTGTCTTATGAGGAAAGGGAAGAGGATTTGTGTGGGGGAAAGAGTGAACAACTCCTGAAATACAATCCAATTTATCAGAAGGTTCCAGTGTTGTTGCATGATGGCAAGCCTGTGCTAGAGTCTTCCATCATTGTCACTTACATTGATGAGGTTTGGCCTTCCAATCCACTACTTCCAAATTGTGCATATGAACGTGCTAAAGCAAGATTCTGGACTGACTACATTGACAAAAAGGTGTTTGACACTGCGAGGGGTATCTGGCTGAGCAAGGGAGGGGAAGAACAAGAAGTTGCCAAGAAGGATTTCATTGAGATCCTAAAGCAACTAGAGGAAGCTCTTGGGGAGAAGGATTTCTTCGGTGGTGATTCCTTTGGCTATGTTGATGTGATTGCAATCCCTCTCACAACATGGTTCTCAGCGTGTGAAAAGTTTGGTGGCTTCAAAGTTGAAGACCACTGCCCCAAGATTTCAGCATGGACTAAGAGGTGCTTTCAGAGGCCAACTGTTGTCAAATCACTCCCAGACCCAGAAAACGTTTACCAGTTTACGATACAGTTCAGGAAGATGCATGGCCTTTGA 666 0.4459 MSKANNVILFGFGVSPFCGRVKVALAEKGVSYEEREEDLCGGKSEQLLKYNPIYQKVPVLLHDGKPVLESSIIVTYIDEVWPSNPLLPNCAYERAKARFWTDYIDKKVFDTARGIWLSKGGEEQEVAKKDFIEILKQLEEALGEKDFFGGDSFGYVDVIAIPLTTWFSACEKFGGFKVEDHCPKISAWTKRCFQRPTVVKSLPDPENVYQFTIQFRKMHGL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90630g00008 221 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc90630g00008 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 210 IPR045073 -
Stsc90630g00008 221 Gene3D Glutaredoxin 1 89 - -
Stsc90630g00008 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 211 IPR010987 -
Stsc90630g00008 221 CDD GST_N_Tau 7 81 - -
Stsc90630g00008 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Stsc90630g00008 221 Pfam Glutathione S-transferase, C-terminal domain 122 196 IPR004046 -
Stsc90630g00008 221 FunFam Glutathione S-transferase U20 90 221 - -
Stsc90630g00008 221 Gene3D - 90 221 - -
Stsc90630g00008 221 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Stsc90630g00008 221 ProSiteProfiles Glutaredoxin domain profile. 1 94 - -
Stsc90630g00008 221 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Stsc90630g00008 221 CDD GST_C_Tau 91 211 IPR045074 GO:0004364|GO:0006749
Stsc90630g00008 221 SFLD Glutathione Transferase (cytosolic) 4 218 IPR040079 -
Stsc90630g00008 221 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90630g00008 Stsc-Chr90630 37817 39159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90630g00008 4 217 Glutathione S-transferase Gene Family AT1G78380 57.674 6.55e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90630g00008 K00799 - pvy:116134903 320.087