Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90629g00078 ATGGTTCCAAACCTTGAAAGCCTAAGCCTAGACAACTGTAGAAGTTTAATTAAGGTGCATGAGTCTGTGGGAGCTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTCAAGACCATTCCAAGTCGTTTCATGCTAAAATCACTCCGTACTGTCCTCCTCACTGGCTGCTCAAAACTAAGAAAGTTTCCTGAGATTGCAGGGAATATGGAACATCTTGAAGAAATTCTTCTCCAAGGAACAGCAATAAAAGAACTACCTCAGTCGATTGAATATCTAAGTGGGCTGAAGTTCTTATTCTTAGAGTCTTGCCAAAATCTTGAGCATCTCCCCAGTAGCCTTCAGAAGTTGCAACAGCTTACTACTCTTTGTCTCAGTGGCTGCTCTAAGCTTCAAAGGCTTCCAAAACTTCCCCTAAATACACAATTTATATACTTGCGTGACTGTAGATCTTTGACAAGCTTTCCAACATTATCCAGCCCATCAAATTTTATTGCAGAGGATTTTCCAAAGTTTCGCCGAATTAACTTTGTTAACTGCCATAAACTGATAAATAAACAAGTCCAGGAGCATATAACAAATCTCTTCCGCAGTAAGGATATTATGCTTCCAGAATATAATTCTTGTGAAGTTGTACTGCCAGGGAGCAAGATCCCAGATTGGTTTCAGTACCAGAGTACTAATGATTCCATTTATCTTGAGGTGTCTTCAAGTTTGTATGGTAAGCCCATTGAGGTGTTTTTTGGCGCAGTTTTTGAGTTGGATAAAGGTGCTACTACAACTGGCATGTTTACAGCTGAATTTGATGTTATTGTCAATGATAAAAAGACAATTATGTGTGCAAACCATTTTGAGGCACTGGACTCGAGTCATGTGTGGTTGATTCGGTTGAAACTTGATCATTTTATGTGGCACCTTAAAAGTATGCATCATTGGAATCACTATCAGATTTCATTGTTGATATTTGAAACATCATCAAAGGAGAAGATAGGAGCAACCTTGAAGAGTTGTGGTTTCCATATGCGATGCTATCAAGAAGGGTATGTGATTGATCATACAAATGTTAGGAAGATGACAGGGTAA 1092 0.3864 MVPNLESLSLDNCRSLIKVHESVGALDKLVTLNLLFCSNLKTIPSRFMLKSLRTVLLTGCSKLRKFPEIAGNMEHLEEILLQGTAIKELPQSIEYLSGLKFLFLESCQNLEHLPSSLQKLQQLTTLCLSGCSKLQRLPKLPLNTQFIYLRDCRSLTSFPTLSSPSNFIAEDFPKFRRINFVNCHKLINKQVQEHITNLFRSKDIMLPEYNSCEVVLPGSKIPDWFQYQSTNDSIYLEVSSSLYGKPIEVFFGAVFELDKGATTTGMFTAEFDVIVNDKKTIMCANHFEALDSSHVWLIRLKLDHFMWHLKSMHHWNHYQISLLIFETSSKEKIGATLKSCGFHMRCYQEGYVIDHTNVRKMTG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90629g00078 363 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 71 227 - -
Stsc90629g00078 363 Pfam C-JID domain 216 345 IPR045344 -
Stsc90629g00078 363 Gene3D Ribonuclease Inhibitor 1 70 IPR032675 -
Stsc90629g00078 363 Gene3D Ribonuclease Inhibitor 71 210 IPR032675 -
Stsc90629g00078 363 SUPERFAMILY L domain-like 3 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90629g00078 Stsc-Chr90629 330497 331834 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90629g00078 4 138 WRKY Transcription Factor Family AT4G12020 47.407 1.44e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90629g00078 - - lja:Lj2g3v0604110.1 479.559