Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90629g00075 | ATGGATCTTCAATCTCCTTTCTCCTCTACTCATTCCTTCAACTTTGACCATGCATGGAAATATGATGTTTTTATTAGCTTTAGAGGCCAAGACACTCGCTACGGTTTCACTGGCAATCTTTGCAATGCTCTTTGTCGTAAAGGAATCCACACTTTCATTGATGATGAGGAGCTTCAAAGGGGAGACGAAATTACTCCCTCACTTCTCAGCGCAATTCAAGAGTCTAGGATTGCCATCATTGTCCTCTCTCCTAACTATGCTTCTTCCTCTTTTTGTTTAGATGAGCTTGTCCATATCCTTCACTGCATTAAGGGAAAGAATCGGTTGGTTTTGCCAGTTTTCTTTGAGGTGGATCCTTGTGATGTGCGCCATCAAAGAAATAGTTTTGGAGAAGCAATGGCTAAGCATGAGAAGAGATTCAAGGATGACTTGAACAAGGTGCAAAAATGGAAGGAGGCTCTGCATCAAGTAGCTAATTTGTCTGGCTATCATTTCAAACATGGGGATGGATATGAGCACATGTTTATTGGAAACATTGTGGAAAACATCTCAAAAAGGATTAAACGACATGGAGCTTTGCCTGTTGCTGATCACCTAGTTGGATTGGAGTCCCCAGTGTCAGCGGTAGCTTTGCTTCTAGATGTTGAATCTAATACTGGTGTTCACATGGTAGGGATATATGGAATTGGTGGAATAGGTAGAACAACACTTGCTCTTGTTGTTTACAACTTGATTGCTGACAATTTTGAAGGTGTCTGCTTTCTTGAAAATGTGAGAGAAAATTCAAATAAACATGGGTTAGTACATCTTCAAAGTATCCTTCTTTGTAAGATACTAGGGAAGGAAGGGATCCAGATAGCAGGTGTTAGAGAAGGGGCTTCACAGATACGACATAGACTCCACCAAAAGAAAGTTCTTTTAGTTCTGGATGATGTTGATGAGTGTGAGCAGTTGACAGCTATTGCTGAAAAACCTGGTTGGTTTGGTCCTGGCAGCAGAATCATTATTACAACACGGGACAAACATTTGCTGACATTTCATGGCGTTGAAAGGACATATGAGGTACAAGGTTTAAATAAGGAAGAGTCCTTAGATTTGCTTATTTGGAAAGCTTTCAAAAGAGATATTGATGACCCAAGGTATACAAATGTTTTAACCCGTGCAGTAACTTATGCTTCTGGACTTCCATTGGCTTTGGAAGTTATAGGTTCTAATTTGTTTGGAAAAGGTATTGAAGAATGGGAATCTGCATTGGATCAATATGAAAAAATTCTTGATAATAAAATACGATATACACTAATGGAAGCTGCAAATATACTTCAAGCTCATTATGGGAGATGCATGAAATATCATATTGGAGTGTTGGTTGAAAAATCACTCGTAAAGATCGAAGGGACTGATAGAGTGACAATACATGATTTAACAGAGGACATGGGCAAAGAAATTGTTCTAGAAAAGTCAACAGAAATACCTGGAAATCGTAGTAGATTATGGTTTTATGAAGATATAGCAAAGGTCTTAGAAGACAATCAAGGGACTAGCACTATTGAAATGATATATTTAGAATTTCCCTTATTGGAAAGGAAAGTGATCAAATGGGATGGAAAAGCCTTTAAAGAGATGACAAATCTCAAAACGCTTATCATAAAAAATGGATGGTTTTCCAGCGCTCCCAAATATCTTCGAAACAGTTTAAGAGTATTGGAATGGTGGGAATATCCTTCAAAGGATTTTCCGTATGATTTTCAACCAAAGGAACTCTCCATACTCAAGTTGCCTCATAGTCTCTGTATGTCACCCATGTTGGATAGCTTAACTAAGGCAAGTGAGTTGGCCTCCTTGAATGTTTTGAATTTTGATTACAATGATTCATTGAGAGAGATACCCGATGTGTCTAGTCTTCAAAGTTTACAAGAATTATCTTTCAAAGAATGCAGCAATTTAATTAAAGTTCACAATTCAGTTGGTTTTCTACCAAAACTTAAAACATTGAATGCTTATGGTTGCTGCAAGCTCAGGAGTTTTCCAACTACAATGACACTGCCCTTATTGGAAGATCTTCGTCTTTCTTTTTGCTCAAGCCTTGAATATTTTCCAGAAATTCCAGAAGAGATGGAAAATCTTGATGGGCTTGAATTGCATTGCACAGACATAAAAGATTTGCCATGTTCATTTCGTAACCTTTCTAGGTTGGCGTATCTGGATATTATTGGGGACAAAATGTGTGAGATGCCAAGTGTCATTGGCATGATGCCACAACTGATTCGGTGTGAGATTGTGTTGGGAGGCAACGAGGGGAGGGTATCAGCAAAGCAGGAGAAGGGGCTTCATGGAATACTCACTCACTCTCTCCCCTCTTCAGATATGGAATATCTTCAACTCACAGACAGCAATTTGTCAGATGAGTTTTTTCCGCTAGCTGTTGAATGGTTTCCCGAAGTGGAAGTTTTATACCTAACAAACAATAATTTCACAGTCCTTCCTGAATGCATCCAACAATTTCGCTTTCAATGGTTTCTCAATGTGGATGGTTGCGAGCATCTTCGCGAGATTAGAGGGATTCCACCGTGCTTGATTCACTTCTCAGCAGTAGATTGCAAATCGTTGAGTTCGAGGGGCACAAACGTGTTACTCAATCAGGGAGTGCACGAGAATGGACCGTACCAAGTTTATTATACCAGGTGGAAGGATTTCAAAGTGGTTTGA | 2706 | 0.3925 | MDLQSPFSSTHSFNFDHAWKYDVFISFRGQDTRYGFTGNLCNALCRKGIHTFIDDEELQRGDEITPSLLSAIQESRIAIIVLSPNYASSSFCLDELVHILHCIKGKNRLVLPVFFEVDPCDVRHQRNSFGEAMAKHEKRFKDDLNKVQKWKEALHQVANLSGYHFKHGDGYEHMFIGNIVENISKRIKRHGALPVADHLVGLESPVSAVALLLDVESNTGVHMVGIYGIGGIGRTTLALVVYNLIADNFEGVCFLENVRENSNKHGLVHLQSILLCKILGKEGIQIAGVREGASQIRHRLHQKKVLLVLDDVDECEQLTAIAEKPGWFGPGSRIIITTRDKHLLTFHGVERTYEVQGLNKEESLDLLIWKAFKRDIDDPRYTNVLTRAVTYASGLPLALEVIGSNLFGKGIEEWESALDQYEKILDNKIRYTLMEAANILQAHYGRCMKYHIGVLVEKSLVKIEGTDRVTIHDLTEDMGKEIVLEKSTEIPGNRSRLWFYEDIAKVLEDNQGTSTIEMIYLEFPLLERKVIKWDGKAFKEMTNLKTLIIKNGWFSSAPKYLRNSLRVLEWWEYPSKDFPYDFQPKELSILKLPHSLCMSPMLDSLTKASELASLNVLNFDYNDSLREIPDVSSLQSLQELSFKECSNLIKVHNSVGFLPKLKTLNAYGCCKLRSFPTTMTLPLLEDLRLSFCSSLEYFPEIPEEMENLDGLELHCTDIKDLPCSFRNLSRLAYLDIIGDKMCEMPSVIGMMPQLIRCEIVLGGNEGRVSAKQEKGLHGILTHSLPSSDMEYLQLTDSNLSDEFFPLAVEWFPEVEVLYLTNNNFTVLPECIQQFRFQWFLNVDGCEHLREIRGIPPCLIHFSAVDCKSLSSRGTNVLLNQGVHENGPYQVYYTRWKDFKVV | 901 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90629g00075 | 901 | Gene3D | - | 15 | 188 | IPR035897 | - | |
Stsc90629g00075 | 901 | Gene3D | Ribonuclease Inhibitor | 774 | 877 | IPR032675 | - | |
Stsc90629g00075 | 901 | PRINTS | Disease resistance protein signature | 392 | 406 | - | - | |
Stsc90629g00075 | 901 | PRINTS | Disease resistance protein signature | 299 | 313 | - | - | |
Stsc90629g00075 | 901 | PRINTS | Disease resistance protein signature | 223 | 238 | - | - | |
Stsc90629g00075 | 901 | PRINTS | Disease resistance protein signature | 632 | 648 | - | - | |
Stsc90629g00075 | 901 | SUPERFAMILY | "Winged helix" DNA-binding domain | 429 | 508 | IPR036390 | - | |
Stsc90629g00075 | 901 | Gene3D | - | 357 | 436 | IPR042197 | - | |
Stsc90629g00075 | 901 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 17 | 189 | - | - | |
Stsc90629g00075 | 901 | Pfam | NB-ARC domain | 204 | 442 | IPR002182 | GO:0043531 | |
Stsc90629g00075 | 901 | Pfam | TIR domain | 20 | 186 | IPR000157 | GO:0007165 | |
Stsc90629g00075 | 901 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 449 | IPR027417 | - | |
Stsc90629g00075 | 901 | ProSiteProfiles | TIR domain profile. | 19 | 187 | IPR000157 | GO:0007165 | |
Stsc90629g00075 | 901 | Gene3D | Ribonuclease Inhibitor | 526 | 680 | IPR032675 | - | |
Stsc90629g00075 | 901 | Gene3D | Ribonuclease Inhibitor | 681 | 766 | IPR032675 | - | |
Stsc90629g00075 | 901 | Gene3D | - | 189 | 352 | IPR027417 | - | |
Stsc90629g00075 | 901 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 21 | 852 | IPR044974 | GO:0006952 | |
Stsc90629g00075 | 901 | SUPERFAMILY | L domain-like | 531 | 871 | - | - | |
Stsc90629g00075 | 901 | SMART | till_3 | 20 | 160 | IPR000157 | GO:0007165 | |
Stsc90629g00075 | 901 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 16 | 163 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90629g00075 | Stsc-Chr90629 | 313712 | 316920 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90629g00075 | 15 | 736 | WRKY Transcription Factor Family | AT4G12020 | 29.712 | 1.30e-69 | 251 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90629g00075 | - | - | aip:107644584 | 1216.45 |