Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90629g00029 ATGGATGACGAAGAGCTTCAAAAAGGGAATGAAATCACATCCTCGCTTGTCAAGGCAATTAAAGAGTCCAGGATTTTCATTATTGTGCTCTCTGCTGATTATGCTTCTTCTTCTTTTTGCTTAGACGAACTCCTCCAGATCATAGACTGCGTTAAGCAAAAGGATCGGTTGGTTTTGCCAGTTTTTTATAATGTGGATCCTTGTGATGTGCGCTATCAAATAAACAGTTTCGCAAGACCAATGGCTAAGCACGAGGAGAGATTCAAAAATGACAATGTCAAAGTGCAGAAATGGAGGATGGCCTTAAAGCGAGTAGCTGATTTGTCCGGTTATCATCTCAAACAGGGGGATGGTCAATATGAACACAAATTTATTGAGGAGATTGTGGAAGACATTTCAAGAAAGATTGAACGCGAACCATTACCTGTTGCTGATCATCCAGTTGGACTAGATTCCGATATGTCGAATGTAATCTCACTTTTAGATATTGAGTCTAAGGATAGTGTTCATATCGTGGGGATTCATGGAATTGGTGGCATTGGAAAAACAACACTAGCTGTAGCAATTTATAACTCGATTGCTGACCATTTTCAGAATTTTTGTTTCCTTGAAGATGTGAAAGGAATTTCCAAAAGCCATGGGTTAGGGTATCTTCAAGAACTCCTCCTTTCTGAACTATTAGGAAAGGATCAAATTAAGTCAAGAGGTGTCCGTGATGCAACTACAAAGATACATCGTGCACTTGGACAAAAGAAGGTTCTTCTGGTTCTAGATAATGTTGATAGCGAGAATCAATTAGAAGCTATTGTTGGAAAGCTTGACTGGTTTTGTCCTGGTAGTAGAATTATTATTACCACACGGGATAAACAGCTATTAATATCTAATGGGGTTGAGAAAACTTATGAGGTAGAAGGTTTAAATCATGCAGATGCTCTTGAGTTGCTTATCTGGAAGGCTTTTAAAACCTCAAAGGTCGATTCAAGTTACACGGATGTTCTAAATCGTGTAGTAGCTTATGCTTGTGGACTTCCATTGGTGTTGCAAGTAATAGGCCCTGCCTTGCGCGGAAAAAGTGTACAAGAATGGAACTCTGCAATAAATCAATATGAAAGAATTCCTCATAATGAGATCCATGAGAAACTTAAAATAAGCTATGATGCTTTGCAGGAAGAAGAGAAGAGTGTTTTCCTTGACATTGCCTGTTGCTTCAAAGGATATGAATTGGCAGAGGTTGAAGATATTCTCCGTGCTCATCATGGAAGCTGTATGAAATATCATATTGGAGTGTTAGTTGAGAAATCTCTCGTTAAGATAAGTAGATATGGTAAGGTGACATTACATGATCTGATAGAGAAACTGGGAAAAGAAATTGTCCGACGAGAATCACCAAAACCTGAAAAGCGTAGCAGGTTGTGGTACTATGAAGATATAGTCAGAATCTTAAAACACAATCAAATATCCTTCAAATTATTTTTCATCTTCTGGTCTGAAAGAACTTTCCATACTCAAGTTACCAGATACTATTTTGTCACTGCAGTTGAATAG 1545 0.3819 MDDEELQKGNEITSSLVKAIKESRIFIIVLSADYASSSFCLDELLQIIDCVKQKDRLVLPVFYNVDPCDVRYQINSFARPMAKHEERFKNDNVKVQKWRMALKRVADLSGYHLKQGDGQYEHKFIEEIVEDISRKIEREPLPVADHPVGLDSDMSNVISLLDIESKDSVHIVGIHGIGGIGKTTLAVAIYNSIADHFQNFCFLEDVKGISKSHGLGYLQELLLSELLGKDQIKSRGVRDATTKIHRALGQKKVLLVLDNVDSENQLEAIVGKLDWFCPGSRIIITTRDKQLLISNGVEKTYEVEGLNHADALELLIWKAFKTSKVDSSYTDVLNRVVAYACGLPLVLQVIGPALRGKSVQEWNSAINQYERIPHNEIHEKLKISYDALQEEEKSVFLDIACCFKGYELAEVEDILRAHHGSCMKYHIGVLVEKSLVKISRYGKVTLHDLIEKLGKEIVRRESPKPEKRSRLWYYEDIVRILKHNQISFKLFFIFWSERTFHTQVTRYYFVTAVE 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90629g00029 514 PRINTS Disease resistance protein signature 340 354 - -
Stsc90629g00029 514 PRINTS Disease resistance protein signature 171 186 - -
Stsc90629g00029 514 PRINTS Disease resistance protein signature 247 261 - -
Stsc90629g00029 514 ProSiteProfiles TIR domain profile. 1 136 IPR000157 GO:0007165
Stsc90629g00029 514 Pfam TIR domain 2 137 IPR000157 GO:0007165
Stsc90629g00029 514 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 111 IPR035897 -
Stsc90629g00029 514 Gene3D - 305 395 IPR042197 -
Stsc90629g00029 514 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 481 IPR044974 GO:0006952
Stsc90629g00029 514 Gene3D - 1 133 IPR035897 -
Stsc90629g00029 514 SUPERFAMILY "Winged helix" DNA-binding domain 376 482 IPR036390 -
Stsc90629g00029 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 399 IPR027417 -
Stsc90629g00029 514 SMART till_3 1 108 IPR000157 GO:0007165
Stsc90629g00029 514 Pfam NB-ARC domain 153 386 IPR002182 GO:0043531
Stsc90629g00029 514 Gene3D - 134 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90629g00029 Stsc-Chr90629 130491 133361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90629g00029 17 494 WRKY Transcription Factor Family AT4G12020 31.481 1.01e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90629g00029 - - aip:107644584 575.859