Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90629g00026 ATGAAGGTTCTTTTGGTTCTAGACGATGTTGATGATTCCAAGCAGCTACAGGCTATTGCTGGAGAACCTGATTGGTTTGGTGGTGGCAGCAGGGTCATTATTACAACACGGGACACACATTTGCTAAAACTCCACGCTGTTGAAAGGACATATTGCGTCCATGGTTTAAATAGGGAAGAGTCCTTTAAGTTGCTTATTTGGAAAGCTTTTAAAACTAATAGTGTTAGCCCGCCAAGTTATGCAGATGTTGTAGATTGTGCGATAACTCATGCCGCTGGACATGTTTGGGAATCTGCATTGGATCATTTTGAGAAACATCTTGATAATAAAATACATAACATGCTTCGAGTAAGTTTTGATGCTTTGGGGAAACAAGAGCAAAGTGTTTTTCTTGATATTGCATGTTGTCTTAATGGATATACATTAGAGGAAATTACTAATCTACTTCAAGCTCATTATGGACGTTCGATGAAATATCACATTAGAGTGTTGGATGAAAAATCTCTCATAAAGAATGGTATATGGGGTAAAAAATGGATAATGCATGATTTGATAGAGAACATGGGCAAAGAAATTGTTCTAGAAGAATCACTTGACATGCCTGGAAGAAAACATGGTCTTGGCCTCTTGACTCTTGAGTACCCAGGATAA 651 0.381 MKVLLVLDDVDDSKQLQAIAGEPDWFGGGSRVIITTRDTHLLKLHAVERTYCVHGLNREESFKLLIWKAFKTNSVSPPSYADVVDCAITHAAGHVWESALDHFEKHLDNKIHNMLRVSFDALGKQEQSVFLDIACCLNGYTLEEITNLLQAHYGRSMKYHIRVLDEKSLIKNGIWGKKWIMHDLIENMGKEIVLEESLDMPGRKHGLGLLTLEYPG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90629g00026 216 Pfam NB-ARC domain 2 93 IPR002182 GO:0043531
Stsc90629g00026 216 Gene3D - 1 50 IPR027417 -
Stsc90629g00026 216 SUPERFAMILY "Winged helix" DNA-binding domain 109 197 IPR036390 -
Stsc90629g00026 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 133 IPR027417 -
Stsc90629g00026 216 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 204 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90629g00026 Stsc-Chr90629 121512 122599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90629g00026 2 197 WRKY Transcription Factor Family AT5G45050 30.093 5.39e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90629g00026 - - aip:107644584 257.299