Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90629g00022 ATGCCAGTTGGAAGGATTCCAAGGTGGTTTGAGCAGCGCTGCAGCGGCGGTACTTGTATTTCTTTCTGGTTTCGTGGCACCAAACTCCCTGCCAAATCTATTCTCTTTGCAATTCTACTCAAAGATGACATCCCTTCCCTTCATGCAGTAGTAATCTCCTTGCGCTTCAATGGCGATCGAGTTTCCCTTAAAAATAGCAAAATGGGGCAATTACTTATTTTTAGTATGAATTCACTACCTAATTACTACGCACCACTTTATGGAAATGGATGGAATGATGCACTACCAGGTTGTGGAAAAGGATGGAATCATGTGGAGGTTAAATTAAATGTAGCACCTGGCAAAGCCTACAAAGTGCGCCCAAACTCACACATTCCCACATACAAACCATTTTATCCTTCTTTCTTTTCATGGCTCTGCATTCTCCATTCTCCTTCCTCTTCTTCTTCTTCTTCTTCCATCAACTATGCATGGAAATACGACGTGTTCATTAGCTTTAGGGGCCAAGATACTCGCTACAGTTTTACTGGCAACCTCTACAAAGCTCTTTGTGATAAAGGAATCCATGCATTCATTGATGACGAGGAGCTTCAAACTGGAGACGAAATCACACCCTCACTTCTCGAAGCAATAAAACAGTCCAGGATAGCTGTCATTGTGCTCTCTCCTAACTATGCTTCTTCCTCTTTTTGCTTAGATGAACTTGTCAATATCCTTGACTTCATCAAGGGAAATAATCGGTTGGTTTTGCCGGTTTTCTATGATGTGGATCCTTCTGATGTGCGTCATCAAAGAAGCAGTTTTGGAGAAGCAATGATAGAGCATGAGAAGAGATTCAAGAATGACATGAACAAGGTGCAGAAATGGAAAGAGGCTCTGCAACAAGTTTCTAATTTGTCAGGCTATCATTTCAAATATGGGGACGGATATGAATACATGTTTATCGGAAACATGGTCGAAAACATCTCAAAAAAGATTAGAAGACGTGTACCTTTGCCTGTTGCTGATCATCTAGTTGGGCTGGAGTCTCCAGTGTCAAAGGTATCTTCGCTTCTAGATGTTGAATCTAATAATGGGGTTCTCATGGTAGGTATTCATGGAATAGGAGGAATAGGTAAAACAACTCTTGCTCTTACAGTTTATAACTTGATTGCAGACAATTTTGAAAGTTCTTGCTTTCTTGAAAATGTGAGAGAAAATTCTAATAGACACGGTTTAGTACATCTTCAAACTATTCTTCTTTATGAGTTATTAGGGGAGAAGGATATTAAGCTAACAAGTAGTAAACAAGGAACTTCTGAGATACAAAAGAGGTTATGTGGAAAGAAAGTTCTTTTGGTTCTTGATGATGTTGATGAGAAGGAGCAGTTAAAAGCTATAGCTGGAAAACCTGATTGGTTTGGTCCTGGAAGCAGAGTCATGATTACAACATGGGACAAACATCTGCTAACACTTTATAGTGTTGAAAGAACATACGAGGTAAAAGGTTTAAATAAAAATGAGTCCTTCAGTTTGCTTACCTGGAAAGCTTTTAAAACTGATACCGTTAGCCCAAGGTATGCGAGTGTTTTAACTTGTGCAGTAAAATATGCTTCTGGGCTTCCATTGGCTTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAAGATTTAGAACAATGGCAATCTGCCTTGGATCAATATGAAAAAATTCTTGATAATAAAATACGTAAGATACTTCAGGTTAGTTTTGATGCTTTGGGAAAAGATGTACGAAGTGTCTTTCTGGATATTGCTTGTTGTTTTAAAGGATATACATTAATGGAAGTAACAAACCTACTTCAAGCTCATTATGGGAGTTGCATGAGATATCATGTTGGAGTGTTGGTTGAAAAATCTCTCATAAAAATTGATGAGAATGGTAAAGTGATGATACATGATTTGATAGAGGACATGGGCAAAGCAATTGTTCTAGAAGAATCACCTGAAATGCCTGGAAAGCGTAGTAGATTATGGTTTTACCAAGATATACTCAGAGTTTTAGAAAACAATCAAAAGTTGGTGAGCTTGAAAGTTTTGAATTTTGACGACAGTGATTCCTTGAAAGAGATTCCTGATGTGTCTAGTCTTCAAACTTTACAAGAATTTTCGTTTAGAAGATGTAGAAATTTAGTTACAATTCATAGTTCAATTGGTTTTCTACCTAAACTTAAAATATTGAATGCTGAAGATTGCAGCAAGCTAAAGAATTTTCCACCTGCTATTAATTTACCTTCACTGGAAGAACTCGGTCTATCTGGTTGCCCAAGCCTTGAGAGTTTTCCAGAAATAGCAGAAGAGATGGAAAATGTGGGATGGCTTGATTTAGAAGGCACAGGCATAAAAGATTTGCCATGTTCATTTCGTAATCTTTCTGGTTTGTGGTATCTGAAAATGAGTAGGAATAATGAAATGTGTAAGATACCAAGTGTGATCAGCATGATGCCACAACTGTGTTCTTGCTATATTTGGGGAGGCGGCGATAAGGGAAGGGTATCAGCAAAGCAAGAGGAGGGGCTACAAGGGATATTGACCCATTCCCTCCCCTCTTCTAATCTGCAACATCTTTATCTCCCCAACTGGAAGCTCTCAGATGAGTTTTTTCCACTAGCTGTTGCATGGTTTCCCAATGTGAAATGCTTAGACCTAAGAGGCAATGATTTCACAGTCCTTCCTCAATGCATCCAACAATTTCGCTTTCTATGGTGGCTCAATGTCGATGATTGCGAGCATCTTCGGGAGATTAAAGGGATTCCACCGTCCATGAAAGACTTCGCTGCAATAAATTGCAAATCATTGAGTCCCAGGGGCACAAGCATGTTAATCAATAAGCAACTGCATGAGAATGGAGGCATGACATTTGCATTGCCAGGAAGAAGGATTCCAAGGTGGTTTGAGCGGCACAAAAGGGGAGAATCTATTTCTTTCTGGTTTCGTGGCAACTACTTCCCTTTTAAAGGTCTTTGCCTTGCAATTCTAATCAAGGATGAGCTCACTTTCCCTGTTTGGATAAGGCCCATTGTGACCATCAATGGCAACCAAGTTCCCCGGGGCAGAGAAATCAAGATGGATCAATTATTCATTTTTGATCTGTCAATGACAAATTGCTATGATTATGATGAAGCACTAAGTTTTGAGGACGAATGGAATCATGCAGAGGTTTCATATGAAGCACGTGACAATGTCTACAGAGTGGTTCCAACTGAGTCAATTGCAAAAGAGATTGGAATGCACATATTGAAATTGAAGCAAGAGAGTAGTATCATGCAAGATATTCGATTCACTTATCCTTATGAAAAGACGAAGCTGATTATAATGATGCTCTCAATAGTATATCACAAGCATACTACTTCATTGCTCATGAAAACATGCATAGATTTCTAG 3399 0.3898 MPVGRIPRWFEQRCSGGTCISFWFRGTKLPAKSILFAILLKDDIPSLHAVVISLRFNGDRVSLKNSKMGQLLIFSMNSLPNYYAPLYGNGWNDALPGCGKGWNHVEVKLNVAPGKAYKVRPNSHIPTYKPFYPSFFSWLCILHSPSSSSSSSSINYAWKYDVFISFRGQDTRYSFTGNLYKALCDKGIHAFIDDEELQTGDEITPSLLEAIKQSRIAVIVLSPNYASSSFCLDELVNILDFIKGNNRLVLPVFYDVDPSDVRHQRSSFGEAMIEHEKRFKNDMNKVQKWKEALQQVSNLSGYHFKYGDGYEYMFIGNMVENISKKIRRRVPLPVADHLVGLESPVSKVSSLLDVESNNGVLMVGIHGIGGIGKTTLALTVYNLIADNFESSCFLENVRENSNRHGLVHLQTILLYELLGEKDIKLTSSKQGTSEIQKRLCGKKVLLVLDDVDEKEQLKAIAGKPDWFGPGSRVMITTWDKHLLTLYSVERTYEVKGLNKNESFSLLTWKAFKTDTVSPRYASVLTCAVKYASGLPLALEVIGSNLFGKDLEQWQSALDQYEKILDNKIRKILQVSFDALGKDVRSVFLDIACCFKGYTLMEVTNLLQAHYGSCMRYHVGVLVEKSLIKIDENGKVMIHDLIEDMGKAIVLEESPEMPGKRSRLWFYQDILRVLENNQKLVSLKVLNFDDSDSLKEIPDVSSLQTLQEFSFRRCRNLVTIHSSIGFLPKLKILNAEDCSKLKNFPPAINLPSLEELGLSGCPSLESFPEIAEEMENVGWLDLEGTGIKDLPCSFRNLSGLWYLKMSRNNEMCKIPSVISMMPQLCSCYIWGGGDKGRVSAKQEEGLQGILTHSLPSSNLQHLYLPNWKLSDEFFPLAVAWFPNVKCLDLRGNDFTVLPQCIQQFRFLWWLNVDDCEHLREIKGIPPSMKDFAAINCKSLSPRGTSMLINKQLHENGGMTFALPGRRIPRWFERHKRGESISFWFRGNYFPFKGLCLAILIKDELTFPVWIRPIVTINGNQVPRGREIKMDQLFIFDLSMTNCYDYDEALSFEDEWNHAEVSYEARDNVYRVVPTESIAKEIGMHILKLKQESSIMQDIRFTYPYEKTKLIIMMLSIVYHKHTTSLLMKTCIDF 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90629g00022 1132 Gene3D - 153 323 IPR035897 -
Stsc90629g00022 1132 Pfam NB-ARC domain 342 577 IPR002182 GO:0043531
Stsc90629g00022 1132 PRINTS Disease resistance protein signature 531 545 - -
Stsc90629g00022 1132 PRINTS Disease resistance protein signature 438 452 - -
Stsc90629g00022 1132 PRINTS Disease resistance protein signature 747 763 - -
Stsc90629g00022 1132 PRINTS Disease resistance protein signature 362 377 - -
Stsc90629g00022 1132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 160 928 IPR044974 GO:0006952
Stsc90629g00022 1132 Gene3D Ribonuclease Inhibitor 663 772 IPR032675 -
Stsc90629g00022 1132 SMART till_3 159 299 IPR000157 GO:0007165
Stsc90629g00022 1132 ProSiteProfiles TIR domain profile. 158 330 IPR000157 GO:0007165
Stsc90629g00022 1132 Gene3D Ribonuclease Inhibitor 773 944 IPR032675 -
Stsc90629g00022 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 590 IPR027417 -
Stsc90629g00022 1132 Pfam TIR domain 159 323 IPR000157 GO:0007165
Stsc90629g00022 1132 Coils Coil 550 570 - -
Stsc90629g00022 1132 Gene3D - 496 580 IPR042197 -
Stsc90629g00022 1132 Gene3D - 324 490 IPR027417 -
Stsc90629g00022 1132 FunFam Disease resistance protein (TIR-NBS-LRR class) 156 328 - -
Stsc90629g00022 1132 SUPERFAMILY L domain-like 637 921 - -
Stsc90629g00022 1132 SUPERFAMILY Toll/Interleukin receptor TIR domain 149 302 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90629g00022 Stsc-Chr90629 105057 110754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90629g00022 671 823 WRKY Transcription Factor Family AT4G12020 37.255 3.06e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90629g00022 - - ahf:112751488 1215.29