Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90629g00016 ATGTTGGATAGCTTACCCAAGACATTGGTGACATTGAAAGTTTTGAATTTTGATTATAGTGATTCTCTGAAGGAAATACCTGATGTATCTAGTCTTCAAAATTTACAAGAACTTTCGTTCCAAAGATGTAGGAATTTAGTTACAGTACACGGTTCAGTTGGTTTTTTAAATAAACTTACGACATTGAATGCTGCATATTGCTGCAAGCTGAGGAGTTTCCCACTTGCTATCAAATTACCCTCACTGGAAAAGCTCTATCTTTTTGGTTGCTCAAGCCTTGAGAATTTTCCTGAAATTCTAGAAAAGATAGAGAATCTAAAACACCTTAGTTTGGAAGACACAGGCATAAAAGATTTGCCATGTTCTTTTCGTAATCTTTCTGGATTGACTAATTTGTCTGTGAGTGGGGATGAAATGTGTAAGATACCAAGTGTTGTTTTTATGATGCCAAAACTGTTTCAATATGAATTTAGTGGAAGAGGCAATAAGGGGATGGTATTAGGAAAGCAAGAGGAGCGGTGGATTCAAGGAATACTTGGTCATTCCCTCCAATCTTCAAATGTTGTATGTCTTAATCTCATAGACATGAATTTGTCAGATGATTTTTTCCCGCTAGCTGTTGCATGTTTTCCAAATGTGGACGAGTTAGAACTGTCAGACAATAATTTCACAGTCCTTCCTGAATGCATCCAACAATTCCGCTTTCTATTATGCCTCAGAGTGGATGGTTGCATTCATCTTCGGGAGATTAGGGGGATTCCACCAATCCTGGAAACCTTCTCAGCAGTAGACTGCAAATCCTTAAGTCTCGGGGGCACAAATGTGTTACTCAATCAGCTAGTGTCAAGGGGTAAAGGTTACTGGTATGTCGGGTCCGCAGGAAGCATCCCAAGGTGGTTTGAGCAGCGTTGCAATGGATCTTCTATTTGTTTCTGGTTTCGTGGCACCAAATTCCCTTGCAATGCTCTTTGCTTTGCAATTCTACTCACATATGACGCCTGTCCCTTAATTCACGTATCAGCCTTCAAAACAATCAATGGCACCCGTATTGACGAATTGCAGGACGAGGCCTTTATGGGTCAATTATTTATTTTTCGTCCGCAGGGGATAATTGATGGTTATGCACACCCAAATTTTTATGAAGGATGGAATTATGTGGAGGTTTCATATGAAGCACGTCTGAGTCAGGGAAATGAGGAAGAGGAAGAGGTCTCAATTGAGTCAATTGCAAAAGAGATTGGGGTGCACGTAGTGAAGCAAAAGATCAGTAGCAGTATAATTGAAGATATTCGATTTACTAATCCTTACAAAATGACAGAACTAATTATAATGATGATGATGTTGTCAATAGTATTGCCCAACCATAAGAAGCAGCCCTTGCTTCTTGAAACATGCATTGGTTTGTGGACATTGCTCGGTCTAACACACTGGTTTTGGTGGGAAGCAGAGGAGGACTTTATGAGTGAGGAGATGGACTCTATGAGTGAGGAGGACTCTATGAGTGAGGATTGGGAGGATTAA 1521 0.4017 MLDSLPKTLVTLKVLNFDYSDSLKEIPDVSSLQNLQELSFQRCRNLVTVHGSVGFLNKLTTLNAAYCCKLRSFPLAIKLPSLEKLYLFGCSSLENFPEILEKIENLKHLSLEDTGIKDLPCSFRNLSGLTNLSVSGDEMCKIPSVVFMMPKLFQYEFSGRGNKGMVLGKQEERWIQGILGHSLQSSNVVCLNLIDMNLSDDFFPLAVACFPNVDELELSDNNFTVLPECIQQFRFLLCLRVDGCIHLREIRGIPPILETFSAVDCKSLSLGGTNVLLNQLVSRGKGYWYVGSAGSIPRWFEQRCNGSSICFWFRGTKFPCNALCFAILLTYDACPLIHVSAFKTINGTRIDELQDEAFMGQLFIFRPQGIIDGYAHPNFYEGWNYVEVSYEARLSQGNEEEEEVSIESIAKEIGVHVVKQKISSSIIEDIRFTNPYKMTELIIMMMMLSIVLPNHKKQPLLLETCIGLWTLLGLTHWFWWEAEEDFMSEEMDSMSEEDSMSEDWED 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90629g00016 506 Gene3D Ribonuclease Inhibitor 1 99 IPR032675 -
Stsc90629g00016 506 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 4 269 - -
Stsc90629g00016 506 Gene3D Ribonuclease Inhibitor 100 282 IPR032675 -
Stsc90629g00016 506 SUPERFAMILY L domain-like 3 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90629g00016 Stsc-Chr90629 79572 81294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90629g00016 8 159 WRKY Transcription Factor Family AT4G12020 36.601 3.11e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90629g00016 - - ahf:112751488 525.783