Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00059 ATGAACAAGATTATGTTAACCATGATGATGGTCATGGTGATGGTGATGATGGTGTTTGTAACCATGGCAGCACCTGCACCTTCACCATCTCCTTCAACATGCCCCATGGACTTGAACTATGTCAAGAGAGTTCCATGGAACTCTTCAGCATGTGAGAACTTCCATTCTCTATCTTCAAAAAACGAAACACACTTCAGCAACTGTTGCACCTCTCTCTTATCTCTATTAGGAATAGGGTTCGCACAGCACCTTAAAGAAACCTCAGATTTCAACCTCCCAAACCTTGAAACCTCCAACTCATGCCTCCATGATTTCCAGTCTCAGCTCAACTACCTCCATCTCCCTAACAACCTCGTTGACCTGTGCTTTGACCCTCACCAGTTCATCATTTCCCCAAACGTTTGTGCAGGGATTCAAACCCTAAAAGATTGGAACAACGAGCTTGGTCAAGTCACTCCTCTTGATGCTAGCTGCAAGCAAGACCTCACTGATTATTCCCTCTGTGATATGTGTCTCTCTGCGGGGTTTCAGGTGAAGCAGAAGCTTATCTCCATTGATGGTAATGCTTCTCACTCTGAAGATTGTTTCCACTTTACTATTCTGTATGCTGCTGCAATTGTGAATCAGTATGGACCTGAGAGCAATGGTGCTATGAGCTGCATCTTTGGTATGTCAATTTACTCGCAGGGCGGTGGCTCTGGTGGGAAATCTCATCAGGGTTTGATTTTTGGGTTAACTGGTGCTGGTGTTGCTTTGTTTGTTATGTCTTGTTTGTTAGGGTTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAAGGATCTTGAATTCGATTTTGATCCTGAGGAACAAGGGTCTAAGCGAAGATTGAGGCCGAATACAGGGTCAATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGAATTTCATTGGGAGGGGAGGGTTTGGGCTTGTTTTCAAGGGGGTTTTGTCGGACGGTTCGGTTGTGGCAGTTAAGAGGGTTTTGGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAATCTGAAGCACCGGAATCTGGTGCCTCTCCGAGGGTGTTGTGTGGTGGATGATGAGGATGAGAGTTTTAATGACAGGGGAAGCCAGAGGTATCTGGTTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTGGCCTCAGTGAGCAGCAAAAGGCGAAGAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCGAAGGGGCTGGCTTATCTGCACTATGGAGTCAAGCCTGCAATTTTTCATAGGGATATCAAAGCAACCAATATATTACTTGATGAAGACATGAGAGCTAGAGTCGCGGATTTCGGTCTTGCTAAGCAAAGCAGGGAAGGCCAGTCTCATCTCACTACAAGAGTAGCCGGAACTCATGGATATCTAGCTCCGGAGTATGCGCTTTATGGTCAGCTTACTGAGAAGAGTGATGTGTATAGCTTCGGGGTTGTTGTTTTGGAGATAATGTGTGGGAGGAGAGCTCTTGATTTGTCTTCAGCAGGATCTCTAAAGGCGTTCTTGATCACGGATTGGGCTTGGTCGTTGGTGAAATCAGGGAACATAGAAGAGGCATTGGATGGTTCTTTGTTGAAGGATGATAGCTTTGGAAGCTCAAATCCAAAGAGCATAATGGAAAGGTTTTTGCTTGTTGGAATTCTATGCTCTCATGTGATGGTTGCTCTTAGGCCAACAATTTCTGATGCATTGAAGATGTTGGAAGGTGATATTGAGGTTCCTCAGATCCCGGATCGGCCAATGCCGCTCGGACACCCTGCTACGTTTTACAATGATAGTGGCAGCACTTTCAGCATATCGCCAGCCTTAAGCGGCCCCAAGTTGCAAGCTGGAGACATGCTCAGGTCCATTGGTAAGAGCTGA 1977 0.4527 MNKIMLTMMMVMVMVMMVFVTMAAPAPSPSPSTCPMDLNYVKRVPWNSSACENFHSLSSKNETHFSNCCTSLLSLLGIGFAQHLKETSDFNLPNLETSNSCLHDFQSQLNYLHLPNNLVDLCFDPHQFIISPNVCAGIQTLKDWNNELGQVTPLDASCKQDLTDYSLCDMCLSAGFQVKQKLISIDGNASHSEDCFHFTILYAAAIVNQYGPESNGAMSCIFGMSIYSQGGGSGGKSHQGLIFGLTGAGVALFVMSCLLGFYVWYDRKVRRKKLKDLEFDFDPEEQGSKRRLRPNTGSIWFKIDELEKATDNFSTKNFIGRGGFGLVFKGVLSDGSVVAVKRVLESDFQGDVEFCNEVEIISNLKHRNLVPLRGCCVVDDEDESFNDRGSQRYLVYDYMPNGNLEDHLFGLSEQQKAKKSLTWPQRKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRRALDLSSAGSLKAFLITDWAWSLVKSGNIEEALDGSLLKDDSFGSSNPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDIEVPQIPDRPMPLGHPATFYNDSGSTFSISPALSGPKLQAGDMLRSIGKS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00059 658 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Stsc90628g00059 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Stsc90628g00059 658 ProSiteProfiles Protein kinase domain profile. 313 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90628g00059 658 CDD STKc_IRAK 319 607 - -
Stsc90628g00059 658 SUPERFAMILY Protein kinase-like (PK-like) 294 606 IPR011009 -
Stsc90628g00059 658 Pfam SPARK 29 196 IPR043891 -
Stsc90628g00059 658 SMART serkin_6 313 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90628g00059 658 Pfam Protein kinase domain 314 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90628g00059 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 115 625 - -
Stsc90628g00059 658 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Stsc90628g00059 658 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 399 613 - -
Stsc90628g00059 658 Gene3D Transferase(Phosphotransferase) domain 1 399 613 - -
Stsc90628g00059 658 FunFam probable receptor-like protein kinase At1g11050 273 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00059 Stsc-Chr90628 321482 324165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00059 26 653 Receptor kinase-like Gene Family AT1G11050 63.376 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Stsc90628g00059 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00059 - - gmx:100806560 1014.99