Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00057 ATGTCTTTCAAAAATAATACTAATAAGCAGGAACATGATGATCATTTAGGAGGTTCATCATCATCATCATCATTATCATCAGGGAAGAACATGTCATTCAATCTGAGGAATGTTTCAAAGCTGATTCTTCCTCCACTTGGAGTTTCATCAAACAAGTATGAGAACCCAGTTGAGTCAATAAAAGGGAGGATCATATCACCAATGGATTCAAGATACAGATGCTGGGAGAGTTTAATGGTGGTTCTGGTAGCATACTCTGCATGGGTGTATCCATTTGAAGTAGCATTCATGCACTCGTCACCACCACAATATAGAAGAATATACATTGTTGACACTCTTGTTGATCTTTTCTTTGCCGTTGACATTGTTTTGACCTTCTTCTTGGCTTACATAGATCGAACAACTCATCTCTTAGTTCATGACTCCAAAAAGATTGTACTCAGGGTTGGATGCATTGCACAGGTCGCATAG 471 0.3864 MSFKNNTNKQEHDDHLGGSSSSSSLSSGKNMSFNLRNVSKLILPPLGVSSNKYENPVESIKGRIISPMDSRYRCWESLMVVLVAYSAWVYPFEVAFMHSSPPQYRRIYIVDTLVDLFFAVDIVLTFFLAYIDRTTHLLVHDSKKIVLRVGCIAQVA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00057 156 MobiDBLite consensus disorder prediction 1 28 - -
Stsc90628g00057 156 Pfam Ion transport protein 73 131 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Stsc90628g00057 156 SUPERFAMILY Voltage-gated potassium channels 67 129 - -
Stsc90628g00057 156 PANTHER POTASSIUM CHANNEL AKT1 34 148 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00057 Stsc-Chr90628 300895 301988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00057 32 148 Ion Channels AT4G22200 66.667 1.44e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00057 K21867 - gmx:100798422 184.111