Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00045 ATGGGAAGTAGTTGTCCTTTTGTGCCCTTTGGGGGTTGTCATCTCACCTTATTCAACCTCAGCTTCAACGAGAAGAGAGAGAAAGAGAAAGAGAAAGAGGTGGTTGCCACATACAAAGAAAGGAGGAGAACCCTAGGAGAGAGAAACCTTGCTTTCATTTCAAGCCCTTTTCGCATTGCGTTTCGGGATCTCGAATCTTCAATCTACAACAAAGGTGTTGGTTCCGCTTTTATGGCAAATTCAAAGGGCTCTTCGGGCATCAGAAATTTGATGTATTCTGGAAAGCATGCTCTGCTTCCTCCTAAAATCCCATTCCCAAGTGTTTCCCAGGGTTATACGGATTATATCCCGAATCCTGCAGTAGGTTCGAAGGTTGCGCATAGACCTAGAGAGGGAAATGCATTCCACCAACGGACATCATCTGAGAGCTTTATTATAGAGGAGCAACCTTCATGGCTTGATGATCTTCTTAATGAGCCGGAGACACCTGTACGAAGGGGCAATCATCGGCGATCATCCAGTGATTCTTTTGCCTACCTAGAGAATGCTAATGTTTCTAACACTGGTTATGCAGATAAGGATGAGTTTAAATTTAGGAATTTAGGATCTATTCCATCTTGGTCACCTCAAGACTTAAATCACAGCAAAGATGTTCGTCATATGCCGATGTATGCAGAAATGAACTCAACTAAAATGAAGAATAGGGCATGGGACTCTTGTTTGAATGTTCCCACACATCCAGGTGGTGTTCCTGCTGTCAAAGACAATGTTGCTTTTCAGAATTCAGGACTGTCGTGCCCGCCAAATGAAGCAGATGGGATTCCTTCAACAGCCAATGAAAAGCATGATGCAGTAGAATCTGGTTCACAGGATGCAAAGTTATCTTCAGAAAGAAAGGATGGTTCAAATGCAAAGTCAACTGCTACTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGAGTTCGTAAACTTCAATACATAGCTGAACTAGAAAGAAATGTACAAGGTTTACAGGCAGAAGGATCGGAAGTATCTGCTGAGCTTGAATTTCTTAACCAGCAGAATCTTATCCTGAGCATGGAGAACAAAGCTCTCAAGCAACGATTAGAAAGTTTAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCAATGTATCAGCAGCAACAGAATCAGCCACAGCAACCTTCTGGCAGCCATCGACGCACAAATAGCAGAGACCTTGAATCCCAGTTTGCTAACCTTTCTCTAAAACTCAAGGACACTAGTTCAGCGCGTGATCCTGTTACCGGTGCCCTTCGAATTTAG 1356 0.4307 MGSSCPFVPFGGCHLTLFNLSFNEKREKEKEKEVVATYKERRRTLGERNLAFISSPFRIAFRDLESSIYNKGVGSAFMANSKGSSGIRNLMYSGKHALLPPKIPFPSVSQGYTDYIPNPAVGSKVAHRPREGNAFHQRTSSESFIIEEQPSWLDDLLNEPETPVRRGNHRRSSSDSFAYLENANVSNTGYADKDEFKFRNLGSIPSWSPQDLNHSKDVRHMPMYAEMNSTKMKNRAWDSCLNVPTHPGGVPAVKDNVAFQNSGLSCPPNEADGIPSTANEKHDAVESGSQDAKLSSERKDGSNAKSTATETDSKRAKQQFAQRSRVRKLQYIAELERNVQGLQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRAMYQQQQNQPQQPSGSHRRTNSRDLESQFANLSLKLKDTSSARDPVTGALRI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00045 451 Gene3D - 314 366 - -
Stsc90628g00045 451 CDD bZIP_plant_RF2 314 360 IPR044759 GO:0003700|GO:0006355
Stsc90628g00045 451 Coils Coil 325 380 - -
Stsc90628g00045 451 MobiDBLite consensus disorder prediction 261 321 - -
Stsc90628g00045 451 SUPERFAMILY Leucine zipper domain 321 363 IPR046347 GO:0003700|GO:0006355
Stsc90628g00045 451 MobiDBLite consensus disorder prediction 402 417 - -
Stsc90628g00045 451 MobiDBLite consensus disorder prediction 402 421 - -
Stsc90628g00045 451 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 87 433 IPR044797 -
Stsc90628g00045 451 SMART brlzneu 310 369 IPR004827 GO:0003700|GO:0006355
Stsc90628g00045 451 Coils Coil 388 408 - -
Stsc90628g00045 451 MobiDBLite consensus disorder prediction 276 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00045 Stsc-Chr90628 220034 224456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00045 148 384 bZIP Transcription Factor Family AT2G42380 34.553 2.20e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00045 - - gmx:100813098 567