Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00044 ATGCAACTATTCCGGCACGTGGAGGCGCCGCCGGGATGGAGAATGGGATGGGATTGGAAAGGGGATGAAGTGATCTGGGCGATGTTTGGAGCAGAGGCAATGGAGCAAGGTAACTGCTCCAAATTCAAAGGCCAAGAAAAGCCACACTGTTGCTTGAAGCATCCTCACATCATTGATCTCACTCCATTCGCTCCTTACAACCAACGCTACTTCAACTGCTGCAAGTCTGGTCTCCTCTCTTCCCTCACTCAAGACATCTCCAACTCCGTCTCCTCCTTCCAAATGAACTATAACAAGCCTACTTCAAATTCAAATGCCACTTTTTTCACCATGCCTCAGAATTTCACCCTTGGAGTCCCTGGTTACACTTGCAGTGAACCCTTTCAGGTCCCCCCTACCAAGTTCACCTCCAATGGACATCGATGGCAACAAGTTTTAGAGACATGGAACGTGACGTGTATGTACTCACAGTATCGAGCATCGCCGGCACCGAAATGCTGCGTCTCGTTATCTGCATTCTATAACAGCACCATAGTTCCCTGCCCCGTTTGCAGCTGCAACTGCAAAGGCCTACCAGGAGCACATTGTATCGAACCGGAGAAGAGTTCTTCATCATCAGTGTTGCAACTGCCACAACAAGAATCAGCACAAGTGGTGAAGTGTTCGCGTCACATGTGCCCGATTCGAATCCACTGGCACGTTAAACAGAGTTACAAAGAGTATTGGCGGGTAAAGATCACCATCACAAATCTCAACTTGTTCAAGAACTACTCCCAGTGGAATCTCGTTGTTCTTCACCCTAACTTGAGAAGTGTAACCCAGGTTTTCAGCTTCAACTACAAGCCCCTCCCTATCTACGGCAATATCAATGATACAGGGATGTTTTGGGGGCTGCAGTACTACAATGACATGTTGCTGTCAGGGAATGATGGAAACGTGCAAACAGAGATGTTGCTTCACAAAGACAAAGAGGATTTCACATTCAGAGAAGGATGGACTTTTCCCAGAAAAGTTTCATTCAATGGTGAGGAATGTGTGATGCCGTCTCCTGATAATTATCCACGCCTTCCAAACACAGCACATGTTCTTACAATCACACCTTTCATACTTTTCTTCCCGTTCTTACTTACTGCCATCTTTTTTCTTCTCATAACTTAG 1158 0.4646 MQLFRHVEAPPGWRMGWDWKGDEVIWAMFGAEAMEQGNCSKFKGQEKPHCCLKHPHIIDLTPFAPYNQRYFNCCKSGLLSSLTQDISNSVSSFQMNYNKPTSNSNATFFTMPQNFTLGVPGYTCSEPFQVPPTKFTSNGHRWQQVLETWNVTCMYSQYRASPAPKCCVSLSAFYNSTIVPCPVCSCNCKGLPGAHCIEPEKSSSSSVLQLPQQESAQVVKCSRHMCPIRIHWHVKQSYKEYWRVKITITNLNLFKNYSQWNLVVLHPNLRSVTQVFSFNYKPLPIYGNINDTGMFWGLQYYNDMLLSGNDGNVQTEMLLHKDKEDFTFREGWTFPRKVSFNGEECVMPSPDNYPRLPNTAHVLTITPFILFFPFLLTAIFFLLIT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00044 385 PIRSF COBRA 1 385 IPR006918 GO:0010215|GO:0016020
Stsc90628g00044 385 PANTHER PROTEIN COBRA 1 371 IPR006918 GO:0010215|GO:0016020
Stsc90628g00044 385 Pfam COBRA-like protein 2 156 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00044 Stsc-Chr90628 217742 219359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00044 1 357 COBRA Gene Family AT1G09790 58.449 3.20e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00044 - - lang:109329241 576.63