Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00041 ATGGAAGTATCAGATTTACAAAAGAAGAAGAAGCAACAACAACAGAGCGGCAACAGCGTGGTGGTCCCATTTGATGGCACCGGAAGGCCCTTCATCATGGGCTCCATCTCCATCCAACCACCTTCCACCTCTTCCTCTTCTTCTTCCTCTTCTTCTTCGAATTCAACCTCTTCTTCTACCTCCGCTGTTGCTGCTCCTCCTACCACCACCACCACCACTCCTCCGCACCTCATCGACGCAAACCTCGCCATCGCCACCAGATCTGATGACAAGGCTCCTCCAGCTAACCCGCCGAAGAGGTCCACGAAGGACAGGCATACGAAGGTGGACGGTCGAGGACGCAGAATCCGAATGCCTGCCACCTGCGCCGCTAGGGTTTTCCAGTTGACCAGAGAATTAGGCCACAAGTCCGACGGAGAGACCATCGAGTGGCTACTCCAGCAGGCTGAGCCTGCTATCATCGCCGCCACCGGAACCGGCACCATCCCCGCCAATTTCTCCACCCTCAACGTTTCTCTACGAAGTAGCGGCTCCACGCTCTCCGCTCCGCCTTCTAAGTCCGCACCTCATACTTTTCATGCCGCGGCGTTGGCTCTCGCTCACCACCATCCTTCTTACGAGGAAGCAGCGTTCCACCAGCACACGGCGTTGCTAGGGTTTCATCACCCTCACCACGCGCAGCACCAGCATCTCATGACTGCTGACCAAATTGCAGAAGCGCTTCCCGGTGGAGAGAGTGGTGGCGGCGACTCGAGCGAGAACTACATGAGGAAACGCTTCAGAGAAGACCTATTCAAAGATGAGAGTAATCATCAGTCGGAGTCGCAGAATAACGAAAGTGGCGGTGGTGGTGCAGGTGCAGGTGGCGATGGTTCTTCGCCAAAGCCGTTCAAAACAAACCTACAAATGCAGCTGCAACAACAGCAACATCAACCAGAAGCAGGAGGAGGAGGAGGAGGCGGTGGTGGTGGTGGTTCTTCTGGTCATGGACTTCTTCGCGCGTCCAATTTGGTACCTGCTACTGCCATGTGGGCCGTAGCGCCGGCACCAGCCAGCGGCGGCACAGCAGGCAGCACAATCTGGATGCTTCCAGTCACTTCCGGAGGTGCAGGTGGCATGGCCGCCGGTGGTGCAGCTTCGGAGGCGCAGATGTGGCCTTTTGGTCATCAAGGAGTGGGTAGTGGCGGCGGCGGTGGCGGAGGGCAAGGTCCACTGCATTTGATGCCTCGATTCAACGTTCCACACGGTGGCGGCGTTGAATTCCAGCAAGAAGGAGGACGCGGTGGGCTTCAGTTGGGTTCCATGGTAATGCCGGCGGCCCAGCAGCAGGCGTCTCAGCATCTTGGATTGACGATGTCAGAATCCAACTTGGGAATGCTTGCTGCTCTTAATGCTTACACTAGAGCTGGTTTGAACATGAACATGAATATGAACATCAATTCTTCTTCTCCTCATCATCATCATCATCATCACCAACAACAACAACAACAACACCATCATCATCAGCCTCAGCCTACTGATAGCGGTGAAGATGCTCCTAACACCTCCCAATGA 1554 0.5541 MEVSDLQKKKKQQQQSGNSVVVPFDGTGRPFIMGSISIQPPSTSSSSSSSSSSNSTSSSTSAVAAPPTTTTTTPPHLIDANLAIATRSDDKAPPANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHAAALALAHHHPSYEEAAFHQHTALLGFHHPHHAQHQHLMTADQIAEALPGGESGGGDSSENYMRKRFREDLFKDESNHQSESQNNESGGGGAGAGGDGSSPKPFKTNLQMQLQQQQHQPEAGGGGGGGGGGGSSGHGLLRASNLVPATAMWAVAPAPASGGTAGSTIWMLPVTSGGAGGMAAGGAASEAQMWPFGHQGVGSGGGGGGGQGPLHLMPRFNVPHGGGVEFQQEGGRGGLQLGSMVMPAAQQQASQHLGLTMSESNLGMLAALNAYTRAGLNMNMNMNINSSSPHHHHHHHQQQQQQHHHHQPQPTDSGEDAPNTSQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 498 517 - -
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 268 332 - -
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 475 517 - -
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 295 313 - -
Stsc90628g00041 517 ProSiteProfiles TCP domain profile. 102 156 IPR017887 -
Stsc90628g00041 517 Pfam TCP family transcription factor 101 229 IPR017887 -
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 483 497 - -
Stsc90628g00041 517 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 507 IPR005333 GO:0003700
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 1 115 - -
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 93 115 - -
Stsc90628g00041 517 MobiDBLite consensus disorder prediction 36 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00041 Stsc-Chr90628 198428 200590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00041 99 456 TCP Transcription Factor Family AT1G35560 42.149 7.68e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc90628g00041 TCP 3.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00041 - - adu:107482753 539.65