Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00022 ATGTGGGAGCAAAATTCATCTAGTTGGAATGAAGATAATTCAGTGCAATCAATTAATCAATCTCTCATAATCTCATTCAAACACCCTGAAGAGTTTATTTGTAGATTCAAAGCACCCAAACTTAGAGAGAGGATCTTCCACTTCAGTGCAGAATCCATTGCCAAGCTGAAAGCTAAGGCAAATAAGGAATCCAGCAGCAATGAAATATCTTCATTCAAATCATTATCATCACTTGCTTGGAGATGCATCACTCGTGCTCGTAGCTTGCCTCCTGATAGAAATACGAGTTGCAAGCTAGCAATGAACAATAGAACCAAAATGGAACCGCCTTTGCCTGTGGAATATGTTGGGAACTCAATTCATTCGGTGAGTGCAGATTCGACGGCAGGGGAATTGCTTGAACATGATCTGGGGTGGGCAGTGTGGAAGCTTCACCTGGCTATTGTGAGCCATACCAACCGAGTGCTGCTCGAGTATCTCAACGAGTGGTTGAAGTCTCCAGCGGTCTACCAACATGCTCAATTCTTTAAAACGGACAATGTGATGATAGGTTGCTCACCCAGATTCAATATGTATGGAAATGAATTTGGAATGGGAAAAGCGGTGGTGGTTCTGAGCGGATATGTTAACAAGTTTCATGGTAAAGTGGCGTCCTATCTTTAG 663 0.4268 MWEQNSSSWNEDNSVQSINQSLIISFKHPEEFICRFKAPKLRERIFHFSAESIAKLKAKANKESSSNEISSFKSLSSLAWRCITRARSLPPDRNTSCKLAMNNRTKMEPPLPVEYVGNSIHSVSADSTAGELLEHDLGWAVWKLHLAIVSHTNRVLLEYLNEWLKSPAVYQHAQFFKTDNVMIGCSPRFNMYGNEFGMGKAVVVLSGYVNKFHGKVASYL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00022 220 Gene3D - 33 219 IPR023213 -
Stsc90628g00022 220 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 21 219 - -
Stsc90628g00022 220 Pfam Transferase family 38 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00022 Stsc-Chr90628 112232 114946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00022 45 209 Monolignol Biosynthesis Gene Families AT5G48930 28.571 3.50e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00022 - - gmx:100775661 256.529