Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90628g00010 ATGGCTTGTTCAAATTGCCAATCTGTGTTGCCTAAACCAAATGATTGGGTTAAGGGTAAATTGGTTGGAACCGGATCGTTTGGTACAGTCAATTTGGCCATGAACAAATCCACTGGAGGGCTTTTTGTGGTGAAATCAGCACATATAGGGGCTGGTTGTGAGGCTTTGAGTAATGAGGTGAAAATCCTAGAGAGTTTAAGTTCATCACCATACATTGTTCAATATCTTGGGACAGAGAAGCACCAAGGTAATCTCAATGTCTTCATGGAGTACATGGCTGGAGGTAGCTTGGCAGATGTGGCTCAAAAGTTCGGTGGATCGTTGGATGAAGAGGTGGTCCGGTTGTACACTAGAGAAATTCTTCATGGTTTACAGCATCTTCACCAGCATGGAATTGTGCATTGTGACCTTAAGTGCAAGAATGTGCTTTTAGGTTCATCCGGGAACATCAAATTGGCAGACTTTGGTTGCGCGAAAAGGCTGGATGTTTCTGCTGATATATGGTCTTTGGGGTGTACAGTTATTGAAATGGCCACTGGAAGGTATCCTTGGGCCGGTGAGGTGTCGAATCCGGTGGCTTCTGTGCTGAGGATTGCCAATGGCGACGAGATACCTCAACTTCCAACTCATTTCTCCAAGGAGGGTTTGGATTTCTTGACCAGGTGCTTGGAGAGAGACCCCCAAAAGAGGTTTACTGCTGAGGAGTTGCTTCACCATCCATTTCTGTCAAGGAGTTCAAGAAGATCTTGTCAGCAAAGACAATATGCATTTTCACCAACAAGTGTTTTTGAGGTTCATGATTTTGAGGATACCTGTGATGTTGATGATGATGATGAGTTAGAAAGCTCTCGAGGGCATGAGAAGTTCTCGATTAGAAACTCATTCTCGCGCCATGATCGACCCGTAGGAATCACAGCATGGCAACAAGAAGACAGTACCCTATGGTCATCTGGGAGCTGGATTACTGTTAGGTCAGGGTAA 981 0.4506 MACSNCQSVLPKPNDWVKGKLVGTGSFGTVNLAMNKSTGGLFVVKSAHIGAGCEALSNEVKILESLSSSPYIVQYLGTEKHQGNLNVFMEYMAGGSLADVAQKFGGSLDEEVVRLYTREILHGLQHLHQHGIVHCDLKCKNVLLGSSGNIKLADFGCAKRLDVSADIWSLGCTVIEMATGRYPWAGEVSNPVASVLRIANGDEIPQLPTHFSKEGLDFLTRCLERDPQKRFTAEELLHHPFLSRSSRRSCQQRQYAFSPTSVFEVHDFEDTCDVDDDDELESSRGHEKFSIRNSFSRHDRPVGITAWQQEDSTLWSSGSWITVRSG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90628g00010 326 CDD STKc_MAPKKK 15 242 - -
Stsc90628g00010 326 Gene3D Transferase(Phosphotransferase) domain 1 163 284 - -
Stsc90628g00010 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Stsc90628g00010 326 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Stsc90628g00010 326 SUPERFAMILY Protein kinase-like (PK-like) 10 263 IPR011009 -
Stsc90628g00010 326 Gene3D Transferase(Phosphotransferase) domain 1 12 162 - -
Stsc90628g00010 326 ProSiteProfiles Protein kinase domain profile. 16 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90628g00010 326 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 15 163 - -
Stsc90628g00010 326 SMART serkin_6 16 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90628g00010 326 Pfam Protein kinase domain 18 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90628g00010 326 Pfam Protein kinase domain 163 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90628g00010 Stsc-Chr90628 58196 59288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90628g00010 8 324 MAP Kinase Kinase Kinase AT5G55090 37.006 3.29e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc90628g00010 Pkinase 2.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90628g00010 K20716 - gmx:100798237 372.474