Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90627g00029 ATGGCGGAATCATCTCGCGAGGAGAACGTGTACATGGCAAAGCTTGCGGAGCAGGCGGAGCGGTACGAGGAGATGGTGGAGTTCATGGAGAAGGTGGCCAAGTCTTCAGACAACGAAGAGCTGACGGTGGAGGAGAGGAACCTGCTGTCGGTTGCTTACAAGAACGTGATCGGTGCGAGGAGGGCTTCGTGGAGGATCATCTCGTCCATTGAGCAGAAGGAGGAGAGTAGGGGCAACGAGGACCATGTTGCAACCATCAAGGAGTATAGGGGAAAGATTGAAACTGAGCTCAGCAAGATCTGTGATGGCATTTTGAACCTCCTTGAGTCCAACCTTGTACCCTCTGCTACCACCCCTGAGTCCAAAGTCTTCTACCTTAAGATGAAGGGTGATTATCATAGGTACCTCGCTGAGTTCAAGACTGCTGCTGAGAGAAAAGAAGCTGCTGAGAGTACTTTGTTAGCTTACAAGTCTGCTCAGGATATTGCTCTTACTGAGCTTCCTCCTACTCACCCGATAAGGCTGGGTCTGGCACTCAACTTCTCTGTGTTCTATTATGAAATTCTCAACTCACCAGATCGTGCTTGTAATCTCGCCAAGCAGGCATTTGATGAAGCAATTTCCGAGCTTGACACCTTGGGTGAAGAATCATACAAGGACACAATAGTAATTGCAATTTTCTGTATCCCAGTCTTCTCTGTCGATTATCATCAATTTGAGATAGTATTCACTGATGAAGCCGGAGAAGAGATCAAGGAAACATCTAAGAACCAACCAGACGAGGGGCAGCAGTAG 795 0.4818 MAESSREENVYMAKLAEQAERYEEMVEFMEKVAKSSDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVATIKEYRGKIETELSKICDGILNLLESNLVPSATTPESKVFYLKMKGDYHRYLAEFKTAAERKEAAESTLLAYKSAQDIALTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDTIVIAIFCIPVFSVDYHQFEIVFTDEAGEEIKETSKNQPDEGQQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90627g00029 264 Coils Coil 12 39 - -
Stsc90627g00029 264 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Stsc90627g00029 264 FunFam 14-3-3 protein epsilon 1 249 - -
Stsc90627g00029 264 SUPERFAMILY 14-3-3 protein 5 224 IPR036815 -
Stsc90627g00029 264 SMART 1433_4 6 253 IPR023410 -
Stsc90627g00029 264 Gene3D - 1 226 IPR036815 -
Stsc90627g00029 264 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Stsc90627g00029 264 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Stsc90627g00029 264 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Stsc90627g00029 264 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Stsc90627g00029 264 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Stsc90627g00029 264 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Stsc90627g00029 264 Pfam 14-3-3 protein 12 224 IPR023410 -
Stsc90627g00029 264 PIRSF 14-3-3 1 227 IPR000308 -
Stsc90627g00029 264 PANTHER 14-3-3 PROTEIN 6 224 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90627g00029 Stsc-Chr90627 144572 146189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90627g00029 4 263 14-3-3 family AT3G02520 80.460 1.31e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90627g00029 K06630 - gmx:547657 424.091