Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90627g00016 ATGGGCATGGTGATGGTGGTGACGATCCTTGTGTTGCTGAGCTTGCTACTCAAACTGGCCTATCAAACCATATCATGCTACTGGCTAACCCCTCTCAGAATCAAGAAGATCATGGAGATGCAAGGCGTTGGTGGCCCTAAGCCCCGTTTCTTCAGCGGCAACATCTTGGACATGGCTTCCCTTGTCTCTAAAACCACCTCTCATGACATGAAAACCATTAGCCACGACATCGTCGGCCGCCTCCTCCCGCATTTTCTCCTCTGGTCCTCCCAATATGGTAAGAGATTTGTATATTGGAACGGAACAGAGCCAAGGTTGTGTCTAACGGAGACTGAATTGATCAAAGAGTTTCTGTCCAAATGCAGCACGGTTTCTGGGCGGTCATGGCAGCAAAGACAGGGATCAAAGCATTTCATCGGAGGAGGGTTGTTGATGGCCAATGCCCAAGATTGGTACCATCAACGTCACATAGTTGCCCCTGCATTCGCCGGTGACAGACTCAAAGGATATGCAGGGCACATGGTTGAATGCACTAAAGAAATGCTTCAATTGCTACAAAATGCATTGGACAGTGGCCGGAATGAAGTTGAGATTGGCGAATACATGACTAAACTCACTGCGGATATCATCTCCAGAACGGAGTTCGGCACAAGCTACCAGAAGGGGAAGAAAATATTCCATCTCCTCAAAGTGTTGCAGACTCGTTGCGCTCAAGCCAGTCGTCATCTTTGCCTTCCCGGAAGCAGGTATTTTCCGAGCAAGTACAACAGAGAGATAAAGTCGTTGAAGATGGAAGTGGAGAGACTATTGATGGAGATAATACAGAGTCGAAAAGACTGCGTTGAAATTGGAAGGAGTGAGTCGTATGGGAATGACTTGTTAGGGATGCTCCTGAATGAGATGGAGAAGAAGAATAGCTTGGATCTTCAGTTGGTGATGGATGAATGCAAGACATTCTTCTTTGCTGGACATGAAACCACTGCACTGTTGCTTACATGGACAGTTATGTTGTTAGCATCAAATCCATCTTGGCAACAAAAGGTTAGAGATGAGATTAAAAGCATATGCAGTGATTCTGGAATCCCCTCTTTCCATCAACTCTCCAAGCTCACTCTTGTAAGTCCCAATATATTCCTCTTGCTAAACCTCTCTGCATAA 1158 0.4611 MGMVMVVTILVLLSLLLKLAYQTISCYWLTPLRIKKIMEMQGVGGPKPRFFSGNILDMASLVSKTTSHDMKTISHDIVGRLLPHFLLWSSQYGKRFVYWNGTEPRLCLTETELIKEFLSKCSTVSGRSWQQRQGSKHFIGGGLLMANAQDWYHQRHIVAPAFAGDRLKGYAGHMVECTKEMLQLLQNALDSGRNEVEIGEYMTKLTADIISRTEFGTSYQKGKKIFHLLKVLQTRCAQASRHLCLPGSRYFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSESYGNDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDEIKSICSDSGIPSFHQLSKLTLVSPNIFLLLNLSA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90627g00016 385 Coils Coil 259 279 - -
Stsc90627g00016 385 Gene3D Cytochrome P450 28 375 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00016 385 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00016 385 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00016 385 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00016 385 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00016 385 Pfam Cytochrome P450 90 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00016 385 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 374 - -
Stsc90627g00016 385 SUPERFAMILY Cytochrome P450 75 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90627g00016 Stsc-Chr90627 75137 77111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90627g00016 5 378 Cytochrome P450 AT5G38450 65.625 1.56e-174 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90627g00016 K10717 - gmx:100808392 622.468