Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90627g00014 ATGGGCATGGTGATGGTGGTGACGATCCTTGTGTTGCTGAGCTTGCTACTCAAACTGGCCTATCAAACCATATCATGCTACTGGCTAACCCCTCTCAGAATCAAGAAGATCATGGAGATGCAAGGCGTTGGTGGCCCTAAGCCCCGTTTCTTCAGCGGCAACATCTTGGACATGGCTTCCCTTGTCTCTAAAACCACCTCTCATGACATGAAAACCATTAGCCACGACATCGTCGGCCGCCTCCTCCCGCATTTTCTCCTCTGGTCCTCCCAATATGGTAAGAGATTTGTATATTGGAACGGAACAGAGCCAAGGTTGTGTCTAACGGAGACTGAATTGATCAAAGAGTTTCTGTCCAAATGCAGCACGGTTTCTGGGCGGTCATGGCAGCAAAGACAGGGATCAAAGCATTTCATCGGAGGAGGGTTGTTGATGGCCAATGCCCAAGATTGGTACCATCAACGTCACATAGTTGCCCCTGCATTCGCCGGTGACAGACTCAAAGGATATGCAGGGCACATGGTTGAATGCACTAAAGAAATGCTTCAATTGCTACAAAATGCATTGGACAGTGGCCGGAATGAAGTTGAGATTGGCGAATACATGACTAAACTCACTGCGGATATCATCTCCAGAACGGAGTTCGGCACAAGCTACCAGAAGGGGAAGAAAATATTCCATCTCCTCAAAGTGTTGCAGACTCGTTGCGCTCAAGCCAGTCGTCATCTTTGCCTTCCCGGAAGCAGGTATTTTCCGAGCAAGTACAACAGAGAGATAAAGTCGTTGAAGATGGAAGTGGAGAGACTATTGATGGAGATAATACAGAGTCGAAAAGACTGCGTTGAAATTGGAAGGAGTGAGTCGTATGGGAATGACTTGTTAGGGATGCTCCTGAATGAGATGGAGAAGAAGAATAGCTTGGATCTTCAGTTGGTGATGGATGAATGCAAGACATTCTTCTTTGCTGGACATGAAACCACTGCACTGTTGCTTACATGGACAGTTATGTTGTTAGCATCAAATCCATCTTGGCAACAAAAGGTTAGAGATGAGATTAAAAGCATATGCAGTGATTCTGGAATCCCCTCTTTCCATCAACTCTCCAAGCTCACTCTTGATTTCGAACTCAGAATAATGGGAGACTGCACTAGCTGA 1155 0.4632 MGMVMVVTILVLLSLLLKLAYQTISCYWLTPLRIKKIMEMQGVGGPKPRFFSGNILDMASLVSKTTSHDMKTISHDIVGRLLPHFLLWSSQYGKRFVYWNGTEPRLCLTETELIKEFLSKCSTVSGRSWQQRQGSKHFIGGGLLMANAQDWYHQRHIVAPAFAGDRLKGYAGHMVECTKEMLQLLQNALDSGRNEVEIGEYMTKLTADIISRTEFGTSYQKGKKIFHLLKVLQTRCAQASRHLCLPGSRYFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSESYGNDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDEIKSICSDSGIPSFHQLSKLTLDFELRIMGDCTS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90627g00014 384 Coils Coil 259 279 - -
Stsc90627g00014 384 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00014 384 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00014 384 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00014 384 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00014 384 Pfam Cytochrome P450 90 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00014 384 Gene3D Cytochrome P450 28 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90627g00014 384 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 371 - -
Stsc90627g00014 384 SUPERFAMILY Cytochrome P450 75 371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90627g00014 Stsc-Chr90627 71373 77111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90627g00014 5 371 Cytochrome P450 AT5G38450 66.313 7.91e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90627g00014 K10717 - gmx:100808392 622.083