Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00069 ATGGGTAGTGATGGAAAAGCAGCAGCATCATCAGTAGCCATAGGAATAGACCTTGGTACAACATACTCGTGTGTTGCAGTGTGGCGCCATGATCGAGTTGAGATCATAGCCAACGACCAAGGCAACAGAATCACACCTTCTTATGTTGCATTCACTGATACTCACAGAATGATCGGAGATGCTGCTAAGAATCAAGTTGCTGCCAACTCTGCCAACACTGTCTTTGACTCAAAGAGGTTAATTGGTAGAAAGTTTAGTGACCCTCACGTCCAGAATGACATGAAACTGTGGCCATTTCAAGTTATTGCCAATGATGATGACATTCCAAGGATTGTTGTTGAATACAAACGTGAGGAGAAGTCTTTCACTGCTGAGGAAATCTCTTCAATGGTCTTAGAAAAGATGCGCGAAATAGCAGAGCAATTTCTTGGAACGCAAGTAAAGAATGCAGTCATTACAGTGCCTGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCCGGCCACATCGCCGGCCTCAATGTACTGAGCATACTCAATGAGCCAAGTGCCGCAGCAATCGCTTACGGCCTTGACACTAAAGATGATTCTAATCATCTTCATGGAAACAGAACTGTCTTTGTCTTTGATTTCGGCGGCGGCACTTTGGATCTTACTCTTCTTACAATTGACAACAATGGAAACATAAAATTTAAGATCCATGGTGGAGACACACATCTTGGTGGAGAGGACTTTGATGCTGCAATGGTTGAATTCTTTGCGACTGAGTTTCAGAGAAAGAAAAGGATTGATCTTAGAAATAACAAAAAAGCCTTATGCAGGTTGAAGGTTGCTTGTGAGAGAGCTAAGAGGCTTCTCTCTTCAACAACTGAGGCCCCCATTGAGCTGTATTCTTTGCATCAGGGACTTGATTTCGATACATCAATTACTCGTGCAAAGTTCGAGGAAATCAGCAAGAATCTCTTTGAGAGATGCATGGAGCTTGTGCATAAGTGTTTTGAGGATGCTAACATGGACAAGAGCAGTGTTGACGAGGTTGTCCTTGTAGGTGGCTCAACTAGGATTCTGAAATTGGAGAAGCTTTTGAAGGAGTTCTTTGATGGGAAGGATCTTTGCAAGAAGTGCATCAATGCGGACGAGGCGGTTGCTTATGGTGCTGCAATCCATGCTTCAAAACTGAGTGGTGCTGCTGATGAAAAGATTCAAGATTTGAAGCTCTGGGAAGCTTCTCCTCTGTCACTTGGCTTGCAAGAAGAAGGAGATTTGATGAAAGTTATAATTCCTAGGAACACCATGGTTCCTACAAAGAAGGATCATCTGTTTACAACCCGCTTCCAGAACCGAAAAGAAGGAGATTTGATGAAAGTCCAGTTTCATATCTATGAGGGAGAGAGATTAATTGCAAGCAACAACAACTTGCTGGGAAGCTTTGATCTGGAGATTCCTCGGGCACGTTGCGGCGTGCCAATTATTAATGTGTGCTTTGAAATAGATTCTAACAGTATCTTACATGTATCGGCCGAGGAGAAATCAATGGGGGTGATGAAGAAGGTGTCTGTAGTGAGCAACAAAGGAAGATTGCCGAGGGAAGAAATTGAGAGGATGGTGAAAGATGCAGAGAAGTACAAGGCTGAAGATGAAGAACGCAGGAAGAAGGCTGAAGCAAGAAACAAGGTAGAAGATCTTGCTTACAATATGAGGGATGTGGCAGGCATTGGTTCCAAGATATCTGCACAAGACAAGGAAAAAATCAACAATGCTATTGATTATGCCTTGAAATGGGTTGGTGAGAATGATTTCGCAACGCTGGATGAGATTAACGAGGTAGGGAAAGGTCTTTCAAGTGTCTTCCATTCTATTTATATGAAGATGATTCAAGTTCATGATTCACTATCACCAGTTGCAGCAAAAACTGAAAGTGGAAGTGAAAGTCAACGCTTGTCATCTAGCTCCAGCAAACACAAAACTGATGTAAACACTATCTCTGGCGTGGTTTCTGCTGTGTGTTCTTTTCTCCAGGTATCTATGCCAATAATTCAGGGCTTGTTTTCATAG 2061 0.4279 MGSDGKAAASSVAIGIDLGTTYSCVAVWRHDRVEIIANDQGNRITPSYVAFTDTHRMIGDAAKNQVAANSANTVFDSKRLIGRKFSDPHVQNDMKLWPFQVIANDDDIPRIVVEYKREEKSFTAEEISSMVLEKMREIAEQFLGTQVKNAVITVPAYFNDSQRQATKDAGHIAGLNVLSILNEPSAAAIAYGLDTKDDSNHLHGNRTVFVFDFGGGTLDLTLLTIDNNGNIKFKIHGGDTHLGGEDFDAAMVEFFATEFQRKKRIDLRNNKKALCRLKVACERAKRLLSSTTEAPIELYSLHQGLDFDTSITRAKFEEISKNLFERCMELVHKCFEDANMDKSSVDEVVLVGGSTRILKLEKLLKEFFDGKDLCKKCINADEAVAYGAAIHASKLSGAADEKIQDLKLWEASPLSLGLQEEGDLMKVIIPRNTMVPTKKDHLFTTRFQNRKEGDLMKVQFHIYEGERLIASNNNLLGSFDLEIPRARCGVPIINVCFEIDSNSILHVSAEEKSMGVMKKVSVVSNKGRLPREEIERMVKDAEKYKAEDEERRKKAEARNKVEDLAYNMRDVAGIGSKISAQDKEKINNAIDYALKWVGENDFATLDEINEVGKGLSSVFHSIYMKMIQVHDSLSPVAAKTESGSESQRLSSSSSKHKTDVNTISGVVSAVCSFLQVSMPIIQGLFS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00069 686 Pfam Hsp70 protein 13 626 IPR013126 GO:0005524|GO:0140662
Stsc90626g00069 686 ProSitePatterns Heat shock hsp70 proteins family signature 2. 210 223 IPR018181 -
Stsc90626g00069 686 Gene3D Actin; Chain A, domain 4 243 326 - -
Stsc90626g00069 686 FunFam heat shock 70 kDa protein-like 75 130 - -
Stsc90626g00069 686 SUPERFAMILY Actin-like ATPase domain 11 195 IPR043129 -
Stsc90626g00069 686 ProSitePatterns Heat shock hsp70 proteins family signature 1. 16 23 IPR018181 -
Stsc90626g00069 686 SUPERFAMILY Actin-like ATPase domain 205 394 IPR043129 -
Stsc90626g00069 686 Coils Coil 531 567 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 378 398 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 12 25 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 490 506 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 40 52 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 216 226 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 62 70 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 345 361 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 405 424 - -
Stsc90626g00069 686 PRINTS 70kDa heat shock protein signature 150 170 - -
Stsc90626g00069 686 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 400 557 IPR029047 -
Stsc90626g00069 686 Gene3D - 558 629 IPR029048 -
Stsc90626g00069 686 FunFam Heat shock 70 kDa 243 326 - -
Stsc90626g00069 686 Gene3D - 196 374 - -
Stsc90626g00069 686 FunFam Heat shock protein 70 14 208 - -
Stsc90626g00069 686 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 556 630 IPR029048 -
Stsc90626g00069 686 MobiDBLite consensus disorder prediction 638 657 - -
Stsc90626g00069 686 Gene3D - 75 130 - -
Stsc90626g00069 686 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 401 562 IPR029047 -
Stsc90626g00069 686 Gene3D - 14 392 - -
Stsc90626g00069 686 PANTHER HEAT SHOCK PROTEIN 70KDA 13 590 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00069 Stsc-Chr90626 354805 358058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00069 13 628 Calmodulin-binding Proteins AT3G12580 60.323 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00069 K03283 - cave:132164136 682.559