Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00068 ATGGGTGATGGAAAAGGAACATCATCATCAGTGGCCGTAGGAATAGATCTTGGAACAACATACTCGTGTGTTGCAGTGTGGCGCCATGATCGAGTTGAGATCATAGCCAACGATCAAGGGAACAGAATCACACCTTCTTATGTTGCATTCACTGATACTCACAGAATGATTGGAGATGCTGCTAAGAATCAAATTGCTGCCAACCATATCAACACTGTCTTTGACTCAAAGAGGCTAATTGGTAGGAAGTTTAGTGACCCTCACGTCCAGAATGACATCAAACTGTGGCCATTTCAAGTTATTGCAAATGCAGATGACATTCCAAGGATTGTTGTTGAGCACAAATGTGAGAAAAAGTCTTTCACTGCCGAGGAAATCTCTTCAATGATCTTAGTAAAGATGCGCGAAATAGCAGAGCAATTTCTTGGAACGCAAGTAAAGAATGCAGTCATCACAGTGCCTGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGACGCTGGCCGCATCGCCGGCCTCAATGTACTGAGCATACTCAATGAGCCAAGTGCCGCAGCAATCGCTTACGGCCTTGACACTAAAGATGATTCTAATCATGTTCATGGAAACAGGACTATTTTCGTGTTTGATTTCGGTGGCGGCACTTTGGATCTTACTCTTCTCACAATTGAAAGCAAAGGAAACATAAAAGTTAAGATCCATGGTGGAGACACACATCTTGGTGGAGAGGATTTTGATGCTGCAATGGTTGAATTCTTTGCGGCTGAGTTTCAGAGAAAGAAAAGGATTGATCTTAGAAACAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTTGTGAGAGAGCTAAGAGGATTCTCTCTTCAACAACTGATGCCTCCATTGAGCTAGATTCTTTGCATAAGGGACATGATTTCTATACATCAATCACTCGTGCTAAGTTCGAGGAAATCAGCAAGAATCTCTTTGCGAGATGCATGGATCTCGTGGATAAGTGTTTCGCGGACGCTAACATGGAAAAGGCAAGTGTTGATGAGGTTGTCCTTGTAGGCGGCTCAACCAGGATTCTGAAATTGGAGCAGCTTTTGAAGGAGTTCTTTGATGGGAAGAATCTTTGCAAGAAGTGCATCAATGCCGACGAGGCGGTTGCTTATGGTGCTGCAATTCATGCTTCAAAACTGAGTGGTGGTGGTGGTGATGAAAAGATTCAAGATTTGAAGCTCTGGGAAGTTACTCCTCTGTCACTTGGCTTGCAAGAAGAAGGTGATTTAATGAAAGTTATAGTTCCTAGGAACACCATGGTTCCTACAAAGAAGGATCATCTTTTTACAACTCGCTTCCATAACCGAAACCAAGGAGATTTGATGATAGTCCAGTTTCATATCTATGAGGGAGAAAGAAAAACTGCAAGCAACAACAACTTGCTGGGAAGCTTTGATCTGGAGATTCCGATTCCCCGCCGGGCACGTTGCGGCGAGCCAATGATTAATGTGTGCTTTGAGATAGATTCCAACGGGATCTTACATGTCTCAGCAGAGGAGAAAGCAATGGGGGTGATGAAGAAGGTGTCTGTGGTGAGCAACAAAGGAAGATTGTCTGAGAGAGAAGTTGAGAGGATGGTGAAAGATGCAGACAAGTACAAGGCTGAAGATGAAGAACACAAGAAGAAAGTTGAAACAAGAAACAAGTTGGAGAATCTTGCTTACAACATGAGGAATGTGGTAAGCATTGGTTCAAAGATATCTGCACAAGACAAGGAAGAAATCAACAATGCTGTTGACTATGCATTGAAATGGGTTGGTGAGAATGATTTTGCAACGCTGGATGAGATTAATGAGGTAGGGAAAGGTCTTTCAAGTGTCTTCCATTCTATTTATATGCAGATGATTCAAGTTCATGAGGAGGGCGGTGGTGATAGTGAAAGTGAAACTCAAAGTCAAAGTGGAAGTCAACGGTTGTCATCTAGCTCCAGCAGACACAAAACTGATGTGAACACCATCACTGGCGTGGTTTCTGCTGTGTGCTCTTTTCTCCAAGTAACCGCGCCCATCTTTCAAGCGTCCTTAGCCTTATTCTCCTAA 2082 0.4328 MGDGKGTSSSVAVGIDLGTTYSCVAVWRHDRVEIIANDQGNRITPSYVAFTDTHRMIGDAAKNQIAANHINTVFDSKRLIGRKFSDPHVQNDIKLWPFQVIANADDIPRIVVEHKCEKKSFTAEEISSMILVKMREIAEQFLGTQVKNAVITVPAYFNDSQRQATKDAGRIAGLNVLSILNEPSAAAIAYGLDTKDDSNHVHGNRTIFVFDFGGGTLDLTLLTIESKGNIKVKIHGGDTHLGGEDFDAAMVEFFAAEFQRKKRIDLRNNKRAICRLKVACERAKRILSSTTDASIELDSLHKGHDFYTSITRAKFEEISKNLFARCMDLVDKCFADANMEKASVDEVVLVGGSTRILKLEQLLKEFFDGKNLCKKCINADEAVAYGAAIHASKLSGGGGDEKIQDLKLWEVTPLSLGLQEEGDLMKVIVPRNTMVPTKKDHLFTTRFHNRNQGDLMIVQFHIYEGERKTASNNNLLGSFDLEIPIPRRARCGEPMINVCFEIDSNGILHVSAEEKAMGVMKKVSVVSNKGRLSEREVERMVKDADKYKAEDEEHKKKVETRNKLENLAYNMRNVVSIGSKISAQDKEEINNAVDYALKWVGENDFATLDEINEVGKGLSSVFHSIYMQMIQVHEEGGGDSESETQSQSGSQRLSSSSSRHKTDVNTITGVVSAVCSFLQVTAPIFQASLALFS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00068 693 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 559 635 IPR029048 -
Stsc90626g00068 693 SUPERFAMILY Actin-like ATPase domain 204 393 IPR043129 -
Stsc90626g00068 693 Gene3D Actin; Chain A, domain 4 242 325 - -
Stsc90626g00068 693 FunFam heat shock 70 kDa protein-like 74 129 - -
Stsc90626g00068 693 PANTHER HEAT SHOCK PROTEIN 70KDA 12 593 IPR013126 GO:0005524|GO:0140662
Stsc90626g00068 693 ProSitePatterns Heat shock hsp70 proteins family signature 1. 15 22 IPR018181 -
Stsc90626g00068 693 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 401 565 IPR029047 -
Stsc90626g00068 693 FunFam Heat shock 70 kDa 242 325 - -
Stsc90626g00068 693 Gene3D - 195 373 - -
Stsc90626g00068 693 MobiDBLite consensus disorder prediction 634 660 - -
Stsc90626g00068 693 ProSitePatterns Heat shock hsp70 proteins family signature 2. 209 222 IPR018181 -
Stsc90626g00068 693 Gene3D - 13 391 - -
Stsc90626g00068 693 Pfam Hsp70 protein 12 629 IPR013126 GO:0005524|GO:0140662
Stsc90626g00068 693 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 400 561 IPR029047 -
Stsc90626g00068 693 FunFam Heat shock protein 70 13 207 - -
Stsc90626g00068 693 SUPERFAMILY Actin-like ATPase domain 10 194 IPR043129 -
Stsc90626g00068 693 Gene3D - 562 631 IPR029048 -
Stsc90626g00068 693 Gene3D - 74 129 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 11 24 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 215 225 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 405 424 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 39 51 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 344 360 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 149 169 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 377 397 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 493 509 - -
Stsc90626g00068 693 PRINTS 70kDa heat shock protein signature 61 69 - -
Stsc90626g00068 693 MobiDBLite consensus disorder prediction 641 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00068 Stsc-Chr90626 348616 351836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00068 6 631 Calmodulin-binding Proteins AT3G12580 59.588 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00068 K03283 - cave:132164136 733.021