Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00058 ATGGCCGGAAAAGGAGAGGGACCGGCGATCGGAATCGATCTTGGAACTACCTACTCTTGCGTCGGAGTGTGGCAGCATGATCGCGTTGAGATCATCGCCAACGATCAGGGCAACCGTACGACGCCGTCTTACGTGGCGTTTACCGATACCGAGAGGCTCATCGGAGATGCCGCCAAGAATCAGGTCGCCATGAACCCTATCAACACCGTTTTTGATGCGAAGAGGTTAATTGGTAGGAGAGTTAGCGATGCCTCAGTTCAGAGTGACATGAAATTGTGGCCATTCAAGGTTGTTGCTGGTGCTGGTGAGAAGCCTATGATTTGTGTTAACTACAAGGGTGAGGAGAAGCAATTTGCAGCAGAGGAGATCTCATCTATGGTCCTAACAAAGATGAGGGAGATTGCTGAGGCTTACCTTGGATCAACTGTGAAGAATGCTGTTGTTACAGTGCCTGCATACTTCAATGACTCTCAGCGTCAGGCAACCAAGGATGCCGGAGTCATTGCCGGTCTCAATGTGATGCGTATCATCAATGAACCCACTGCTGCTGCAATCGCCTATGGTCTTGACAAGAAGGCCACCAGCGTGGGTGAGAAGAACATCTTGATCTTTGATCTTGGTGGTGGTACCTTTGATGTCTCTCTTCTCACCATTGAGGAGGGTATCTTTGAAGTGAAGGCCACTGCCGGAGACACCCACCTTGGAGGAGAGGACTTTGACAATAGGATGGTGAACCATTTTGTTCAAGAGTTCAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCCAGAGCACTTAGGAGGTTGAGGACAGCATGCGAGAGGGCGAAGAGGACTCTTTCATCCACTGCTCAGACCACCATTGAGATCGACTCTCTCTTTGAGGGTATTGATTTCTATTCAACAATCACCCGTGCTAGGTTCGAGGAGCTTAACATGGACCTCTTTAGAAAGTGTATGGAGCCTGTTGAGAAGTGTCTCAGGGATGCAAAGATGGACAAGAGCACTGTCCATGATGTTGTACTTGTTGGTGGCTCTACTAGGATTCCCAAGGTTCAGCAGCTATTGCAGGACTTTTTCAATGGGAAGGATCTGTGCAAGAGCATCAACCCTGATGAAGCTGTTGCTTACGGTGCAGCTGTTCAGGCTGCCATCTTGAGTGGTGAAGGCAATGAGAAGGTTCAAGACTTGTTGCTTTTGGATGTCACCCCACTGTCTCTAGGTTTGGAAACTGCTGGAGGTGTCATGACTGTGTTGATTCCTAGGAACACAACCATTCCTACCAAGAAGGAGCAAGTGTTTTCTACCTATTCAGACAACCAACCTGGTGTCTTGATTCAAGTTTATGAAGGTGAGAGAACAAGGACCAGGGACAACAACTTGCTCGGTAAGTTCGAGCTTTCTGGCATTCCTCCAGCCCCTCGTGGTGTTCCCCAGATCACTGTTTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAGGACAAAACCACTGGGCAGAAGAACAAGATTACCATCACCAATGACAAAGGAAGGTTGTCTAAGGAAGAAATTGAAAAGATGGTTCAAGAAGCAGAGAAATACAAGTCGGAAGATGAGGAGCACAAGAAGAAGGTTGAGGCAAAGAACACCTTGGAAAACTATGCATACAACATGAGGAACACAATTAAGGATGACAAGATCAGCTCAAAGCTTTCCCCGGCTGACAAGACAAAGATTGATGATGCAATTGAACAGGCTATTCAATGGCTTGATGCTAACCAGCTTGCAGAAGCTGATGAATTTGAGGACAAGATGAAGGAGCTTGAGAGCATCTGCAACCCCATCATAGCCAAGATGTACCAAGGTGGAGCAGGTGGTGAGGTAGATGATGATGCTCCTCCTGCTGGTGGAAGCGGTGCTGGTCCCAAGATTGAGGAGGTCGATTAA 1938 0.4778 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVVAGAGEKPMICVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNILIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNTLENYAYNMRNTIKDDKISSKLSPADKTKIDDAIEQAIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGGAGGEVDDDAPPAGGSGAGPKIEEVD 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 369 389 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 337 353 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 58 66 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 396 415 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 477 493 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 36 48 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 146 166 - -
Stsc90626g00058 645 PRINTS 70kDa heat shock protein signature 209 219 - -
Stsc90626g00058 645 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Stsc90626g00058 645 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Stsc90626g00058 645 Gene3D - 545 619 IPR029048 -
Stsc90626g00058 645 FunFam Heat shock protein 70 10 196 - -
Stsc90626g00058 645 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc90626g00058 645 FunFam Heat shock 70 kDa protein 71 126 - -
Stsc90626g00058 645 FunFam heat shock 70 kDa protein-like 363 388 - -
Stsc90626g00058 645 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Stsc90626g00058 645 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Stsc90626g00058 645 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Stsc90626g00058 645 FunFam Heat shock 70 kDa protein 197 260 - -
Stsc90626g00058 645 FunFam Heat shock 70 kDa protein 539 645 - -
Stsc90626g00058 645 FunFam Heat shock 70 kDa 391 545 - -
Stsc90626g00058 645 Gene3D Actin; Chain A, domain 4 235 318 - -
Stsc90626g00058 645 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Stsc90626g00058 645 MobiDBLite consensus disorder prediction 619 645 - -
Stsc90626g00058 645 FunFam Heat shock 70 kDa 235 318 - -
Stsc90626g00058 645 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Stsc90626g00058 645 Coils Coil 521 541 - -
Stsc90626g00058 645 Gene3D - 10 384 - -
Stsc90626g00058 645 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Stsc90626g00058 645 Gene3D - 71 126 - -
Stsc90626g00058 645 FunFam Heat shock cognate 70 kDa protein 2 319 362 - -
Stsc90626g00058 645 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Stsc90626g00058 645 Gene3D - 192 366 - -
Stsc90626g00058 645 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00058 Stsc-Chr90626 277449 280114 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00058 1 645 Calmodulin-binding Proteins AT3G12580 91.692 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00058 K03283 - gmx:100789485 1211.05