Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00054 ATGGCAATGGACCTCTCAAGAATCACAGTGAGGCCATTCAAGCTAAGCGATCTGGAAGACATGTGGTTATGGGCTAGTGACGACAGAGTCACTTACAATACGCGATTGGATACATGTGTAACCAAAGAGCAAGCTGTAGCATTGATCGACGAATGCATAACACACGAATTCAAAAAGTCTATTTGCTTGGATGATCGGTCGATCGGCATTATATGGGTGATTCCGTGGGCTGGTGATGCCAAATTCAAGGCTGATTTAGGGTATGCAATAGGGTTCAACTATTGGGGCAAAGGGATAGCCACAAAAGCAGTGAAGATTGTTTTGTCACAAGCGTTCCATGTCTTACCTTATTTGAAGAGGTTGCAGGCTTTTACTCTTGTGGAGAACAAGGCCTCTCAAAGAGTGTTGCAAAAGGTAGGGTTCCAAAGGGAGGGAGTGCTTAGGAATTTCTTTTATGCCAAGGGCAACTTTATAGATCCCTTGGTTTATAGTTTTTTGCCAACAAATGAAATTCCTAATCTTGATTAG 528 0.428 MAMDLSRITVRPFKLSDLEDMWLWASDDRVTYNTRLDTCVTKEQAVALIDECITHEFKKSICLDDRSIGIIWVIPWAGDAKFKADLGYAIGFNYWGKGIATKAVKIVLSQAFHVLPYLKRLQAFTLVENKASQRVLQKVGFQREGVLRNFFYAKGNFIDPLVYSFLPTNEIPNLD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00054 175 Pfam Acetyltransferase (GNAT) domain 7 142 IPR000182 GO:0016747
Stsc90626g00054 175 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 169 - -
Stsc90626g00054 175 Gene3D - 3 165 - -
Stsc90626g00054 175 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 159 IPR000182 GO:0016747
Stsc90626g00054 175 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 166 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00054 Stsc-Chr90626 241031 241589 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc90626g00054 Acetyltransf_3 5.9e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00054 - - gmx:100802886 214.542