Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00048 ATGCCCAGAAAATTCAAGGGACTTGCAGTGGGAATTGACCTTGGGACGACTTACTCGTGCGTCACGGTGTGGAAAGACAAGAAAAGCCGAGTTGAGATCATCCACAATGACCAGGGAAACAGAACAACACCTTCTTGTGTTGCTTTTACAGATCACCAGAGGTTGATTGGTGATGCTGCTAAGCACCAAGCTGCTTTTAACCCAACCAACACTTTCTTTGTGATTGTTATTACTTACAAGGGTTCTCCGGAAGAAATTTCTTCTATGATTCTCACAAAGATGCGTGAGATTGCGGAAGAGAGAAACATTTTCATCTTTGATCTTGGTGGTGGATCTTCTAGGATTCCCAAAGTACAGAAGCTATTGCAGAAATTCTTCGATGGGAAAGAACTCTGCAATAGCATTAGTCCTGATGAAGCAGTTGCTAATGGAGCAGCAGTTCAAGCTGCATTACTGAGTAAAGGCATGAAGAATGTTCCAGACATGAAGACAGCACAATTCTATACAGATAAGGATAACCAATACTCTGTGCTTGAACAAGTTTATGAGGGTGAGAGGTCGAAAGCGAGTGATAACAACTTGCTGGGCAAGTTCACACTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTACAGTATGCTTTGATATAGATTTTAATGGTATTCTTTGTGTATCTGCTAAGGAAAATACCACTGGCAATAGGAACCAGATTACTATAACTGATGACAAAGGAAGAATGTCAAGTGGAGAAATTGCAAGACTGGTTAGGGAAGCTGAGGAATACAGGGCTGAAGATATGAAGTTTCTTGAGAAGGCTGAAGCTATAAATGCTTTGGATGATTATGTTTACAAAATGGATAAAGCTTTAAGGGACCAGGGAATTTTAGTTAATAGTTTAACGATCAAGACATGA 918 0.4085 MPRKFKGLAVGIDLGTTYSCVTVWKDKKSRVEIIHNDQGNRTTPSCVAFTDHQRLIGDAAKHQAAFNPTNTFFVIVITYKGSPEEISSMILTKMREIAEERNIFIFDLGGGSSRIPKVQKLLQKFFDGKELCNSISPDEAVANGAAVQAALLSKGMKNVPDMKTAQFYTDKDNQYSVLEQVYEGERSKASDNNLLGKFTLSGIPPAPRGHPITVCFDIDFNGILCVSAKENTTGNRNQITITDDKGRMSSGEIARLVREAEEYRAEDMKFLEKAEAINALDDYVYKMDKALRDQGILVNSLTIKT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00048 305 SUPERFAMILY Actin-like ATPase domain 79 152 IPR043129 -
Stsc90626g00048 305 Gene3D - 108 135 - -
Stsc90626g00048 305 Pfam Hsp70 protein 157 295 IPR013126 GO:0005524|GO:0140662
Stsc90626g00048 305 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Stsc90626g00048 305 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 159 281 IPR029047 -
Stsc90626g00048 305 Gene3D - 136 150 - -
Stsc90626g00048 305 Gene3D - 2 107 - -
Stsc90626g00048 305 FunFam heat shock 70 kDa protein-like 3 103 - -
Stsc90626g00048 305 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc90626g00048 305 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc90626g00048 305 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc90626g00048 305 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc90626g00048 305 PANTHER HEAT SHOCK PROTEIN 70KDA 9 101 IPR013126 GO:0005524|GO:0140662
Stsc90626g00048 305 SUPERFAMILY Actin-like ATPase domain 8 101 IPR043129 -
Stsc90626g00048 305 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 151 299 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00048 Stsc-Chr90626 218179 219280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00048 1 99 Calmodulin-binding Proteins AT3G12580 52.174 4.01e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00048 K03283 - vvo:131625172 213.772