Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00047 ATGGTTCTGCTGGATGTCACTCCTCTCTCTCTTGGCTTAGCCACAAAAGGAGATTTGATGAGTGTAGTGATTCCTAGGAATACACCCATTCCTGTAAAGATGGATGATGTTTTTCTCACAACCGAAGATAATCAATCCACTGCTTCATTCCCAGTATATGAAGGTGAAAGGACAAAAGCCAGTGAGAATAACTTGCTTGATAAGTTTTCCCTTTCGGGGCTTCCTCGTATTCCTCGAGGCCATGCTATCAATGTTATGTTTGAGCTTGATTATGATGGTATCTTGAAGGTTAGTGCTGAGGATGAAACAACTGGCAGCAAGAAGGGAATTACCATCACTAATGAGAAAGGGAGACTCTCAAGTGCTGAGATAAAGAGAATGATTGAGGAAGCTGCATTTTTCAAGGAAGAGGATAAGAAGTTCAAGAAGATGGTGGAAGCAAAGAATGCTTTGGATGAGTATATTTACAGGATGGAGAAAGCTATGAAGAATTTTGATGTAAGCTCTAAGGTTTCAGCTTCAGAAAAGGAGACAATAATGGCTGCATTCAGAAAGGGAAAGAGATTGCTTAGGAGTGAGGAGCATATGAGGCTTCAGTGTTTGAGGACTATATTAAGAAGTTACAAGATATTTGTCAACCAATAG 645 0.4016 MVLLDVTPLSLGLATKGDLMSVVIPRNTPIPVKMDDVFLTTEDNQSTASFPVYEGERTKASENNLLDKFSLSGLPRIPRGHAINVMFELDYDGILKVSAEDETTGSKKGITITNEKGRLSSAEIKRMIEEAAFFKEEDKKFKKMVEAKNALDEYIYRMEKAMKNFDVSSKVSASEKETIMAAFRKGKRLLRSEEHMRLQCLRTILRSYKIFVNQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00047 214 Gene3D - 120 209 IPR029048 -
Stsc90626g00047 214 Pfam Hsp70 protein 1 192 IPR013126 GO:0005524|GO:0140662
Stsc90626g00047 214 FunFam Heat shock 70 kDa protein 1 148 - -
Stsc90626g00047 214 PANTHER HEAT SHOCK PROTEIN 70KDA 1 176 IPR013126 GO:0005524|GO:0140662
Stsc90626g00047 214 Coils Coil 144 164 - -
Stsc90626g00047 214 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 146 194 IPR029048 -
Stsc90626g00047 214 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 152 IPR029047 -
Stsc90626g00047 214 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 117 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00047 Stsc-Chr90626 216921 217565 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00047 1 209 Calmodulin-binding Proteins AT3G12580 47.748 1.70e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00047 K03283 - gmx:102667578 214.157