Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00045 ATGGCAAAGGGTCGTGCCATAGGAATCGACCTTGGAACTACATACTCGTGTGTTGCAGCATGGGAAGAACAAAATGGTCGTGCTGAGATTATTGTGAATGATCAAGGCAACAGAACCACACCTTCTTTCGTTGCCTTCACTGATACTCAAAGGTTGATCGGTGATGCTGCTAAAAATCAAGCTGCATTCAACCCCTCCAACACCATCTTTGATGCTAAAAGATTGATTGGAAGAAAATATAAAGATCCTGAAATTGAGTGTGATCTTAATTTGTGGCCATTCAAGGTTGTACCTGGTGCTGATGACAAACCCATGATTAAGGTGAACTACAAAGGCCAGGAAAAGTGCCTTGCTGCTGAAGAAATCACATCTATGATCCTCACAAAGATGAAGGACATTGCAGGGGCCTACATGGGGTCTTCTGTGGAAAATGCTGTGATTACAGTACCTGCTTATTTCAATGACTCACAGCGAAAAGCCACCAAAGATGCCAGCATCATTGCTGGCCTTAATGTCATCAGAATCATCAACGAACCAACTGCTGCAGCTCTTGCATATGGCCTTCAAAAGAGAGCTACCTTTTCTGGAAAGCGAAATGTTTTCATATTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTTGTCACAATTGAACATGAAGTCTTTGAAGTTAGGGCCACTGCCGGAGACACTCATCTCGGAGGGGAAGATTTCGATAACAGAATGGTGCATCACTTTGTGCAAGAGTTCAAGAGAAAGGACAGAGTTGACATTACTGGAGACCCTAGAGCACTGAGGAGGTTGAGAAACGAATGCGAGAAGGCAAAAAGGACCCTTTCACATGCCAATGATACTACAATTGAGATAGATGCTTTGTTTCAAGGCATTGATTTTCGTTTTCCTATTACTCGTGCAAGGTTTGAAGAACTCAATAGGGACTTGTTTGAGAAGTGCATGGAGATAGCTCAGAATTGTCTAGATGATGCTAAGATGGAGAAAAGGGAGTTACATGATGTTGTCCTTGTTGGTGGATCTTCAAGGGTTCCGAAAGTGCAGAGTTTATTGGAGAAATTCTTTGAGAGGAATGATCTTTGCAATAGTATCAACCCGGATGAAGCTGTTGCTTATGGTGCTGCAATTCAAGCTGCTTTGCTTAGTGAAAGTTATAGCATTGTGCCAAGCATGGTACTAGTTGATGTCACTCCTCTGTCTCTTGGTGTACAAGTTAAAGGAGATTTGATGAGTGTAGTGATTCCTAGGAATACAGCCATTCCTGTAAAGATGGATGGTGTATACCATACAACTAAAGATAACCAATCATGGATGTCATTGCCAGTGTATGAAGGTGAAAGGACAAAAGCCAGTGAGAATAACTTGCTTGATAAGTTTTCCTTTCGGGGCTTCCTCATGCTCCTCGAGGCTATCCTATCAATGTTATGTTTGAACTTGATTATGATGAAAGGGAGACTCTCAAGTGCTGAGATTAAGAGAATGATTGAGGAAGCTGCAGTGTTCAGGGAAGAGGATAAGAAGTTCAAGAAGATTGTGGAAGCAAAGAATGCTTTGGATTATTATATTTACAGAAAAGAGAGAGGATTGAAGGATTTTAATGTAAGCTCTAAGGTTTCAGCTTCCCAAAAGGAGGCAATATTGTCTGCGTTCACAGTGGGAAAAACGTTGCTTGAGAGTGAGAAGCATAATGAGGCTTCTGTGTTTGAGGACTATCTTAAAATGTTACAGAACATTTGTCAATCAATAGTGTGA 1764 0.415 MAKGRAIGIDLGTTYSCVAAWEEQNGRAEIIVNDQGNRTTPSFVAFTDTQRLIGDAAKNQAAFNPSNTIFDAKRLIGRKYKDPEIECDLNLWPFKVVPGADDKPMIKVNYKGQEKCLAAEEITSMILTKMKDIAGAYMGSSVENAVITVPAYFNDSQRKATKDASIIAGLNVIRIINEPTAAALAYGLQKRATFSGKRNVFIFDLGGGTFDVSLVTIEHEVFEVRATAGDTHLGGEDFDNRMVHHFVQEFKRKDRVDITGDPRALRRLRNECEKAKRTLSHANDTTIEIDALFQGIDFRFPITRARFEELNRDLFEKCMEIAQNCLDDAKMEKRELHDVVLVGGSSRVPKVQSLLEKFFERNDLCNSINPDEAVAYGAAIQAALLSESYSIVPSMVLVDVTPLSLGVQVKGDLMSVVIPRNTAIPVKMDGVYHTTKDNQSWMSLPVYEGERTKASENNLLDKFSFRGFLMLLEAILSMLCLNLIMMKGRLSSAEIKRMIEEAAVFREEDKKFKKIVEAKNALDYYIYRKERGLKDFNVSSKVSASQKEAILSAFTVGKTLLESEKHNEASVFEDYLKMLQNICQSIV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00045 587 Gene3D - 191 365 - -
Stsc90626g00045 587 Gene3D - 70 125 - -
Stsc90626g00045 587 Gene3D - 490 587 IPR029048 -
Stsc90626g00045 587 FunFam Heat shock protein 70 7 196 - -
Stsc90626g00045 587 SUPERFAMILY Actin-like ATPase domain 197 385 IPR043129 -
Stsc90626g00045 587 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 57 65 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 208 218 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 5 18 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 368 388 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 394 413 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 35 47 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 336 352 - -
Stsc90626g00045 587 PRINTS 70kDa heat shock protein signature 145 165 - -
Stsc90626g00045 587 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 523 IPR029047 -
Stsc90626g00045 587 FunFam heat shock 70 kDa protein-like 70 125 - -
Stsc90626g00045 587 Coils Coil 265 285 - -
Stsc90626g00045 587 Gene3D Actin; Chain A, domain 4 234 317 - -
Stsc90626g00045 587 Pfam Hsp70 protein 6 467 IPR013126 GO:0005524|GO:0140662
Stsc90626g00045 587 Pfam Hsp70 protein 487 586 IPR013126 GO:0005524|GO:0140662
Stsc90626g00045 587 PANTHER HEAT SHOCK PROTEIN 70KDA 6 544 IPR013126 GO:0005524|GO:0140662
Stsc90626g00045 587 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Stsc90626g00045 587 FunFam Heat shock 70 kDa 234 317 - -
Stsc90626g00045 587 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 470 IPR029047 -
Stsc90626g00045 587 SUPERFAMILY Actin-like ATPase domain 5 190 IPR043129 -
Stsc90626g00045 587 Gene3D - 7 383 - -
Stsc90626g00045 587 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Stsc90626g00045 587 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 517 586 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00045 Stsc-Chr90626 212412 214526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00045 2 587 Calmodulin-binding Proteins AT3G12580 58.920 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00045 K03283 - qsu:111985979 721.079