Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00044 ATGGCAACAAAGCATAAGGGTCCTGCCATAGGGATTGATCTTGGAACTACATACTCGTGTGTTGCAGCATGGGAAGAGAAAGAAGGTCGTGCTGAGATTATTGTCAATGATCGAGGCAACAGAACAACACCTTCTTTTGTTGCCTTCACTCATACTCAATGGTTGATTGGTGATGCTGCTAAAAATCAGGCTGCCTTAAACCCCTCCAACACAATCTTTGATGCTAAAAGGTTAATTGGCAGAAAATACAAAGATCCTACAATTGAGAATGATCTTAAGTTGTGGCCATTCAAGGTTGTATCTGGTGCTGATGACAAACCCATGATTAGGGTGACATACAAAGGCAAGGAAAAGTGCCTTGCTGCTGAAGAAATCTCATCTATGATCCTCATGAAGATGAAGGACATTGCAGAAGCCTATATGGTGTCTTCTGTGGAAAATGCAGTGATTACGGTCCCTGCCTATTTCAATGACTCGCAGCGAAAAGCCACCAAAGATGCTAGCATCATTGCCGGCCTTAATGTGATCAGAATCATCAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTCAAAAGAGAGCCAAGTGTTCCGGAAAGCGAAATGTTTTCATATTTGATCTTGGTGGTACCTTTGATGTGTCTCTTGTCACAATTGAAGATGAAGTCTTTGAAGTCAAGGCCACTGCCGGGGACACTCATCTTGGAGGGGAAGATTTTGATAACAGAATGGTGAGTCACATGGCACAAGAGTTCATAAGAAAGTACAAAATCGACATTACTGGTGATCCTAGAGCACTGAGGAGGTTGAGAAACAAATGTGAAAAGGCAAAAAGAACACTCTCACATGCTAATGATACTACAATTGAGATAGATGCTTTGTTTCAAGGCATTGATTTTCATTTTTCTATAACTCGTGCAAGGTTTGAGGAACTCAACCGGGATTTCTTTGAGAAATGCATGGAGATTGCTCAGAATTGTCTTGATGATGCTAACATGGAGAAAAGGGAGGTTCATGATGTTGTCCTTGTTGGTGGATCTTCAAGGATTCCAAAAGTGCAGAGTTTGTTGCAGAATTTCTTTGAGGGGAAGACTATATGCAATAGTATTAACCCGGACGAAGCTGTTGCTTATGGTGCTGCAGTTCAAGCTGCATTGTTGAGTGAAGACTATAGCGTTGTCCCAAATTTGGTTCTGGTGGATGTTACTCCTATTTCACTTGGTATAGGCGCTCATAGAGATTTAATGAGTGTAGTGATTCCTAGGAATACCGCCATTCCTGTAAAGATGGGTTCTGTATTTGACACAATTAAAGATAATCAATCAAGCATGTCACTCCCAGTGTATGAAGGTGAAAGGACAAAAGCCAGTGAGAATACTTTGCTTGCTAAGTTTTCCCTTTCGGGGCTTCCTCTTGTTCCTCGAGGCCATCTTGTCAATGTTATGTTTGAACTTGATTATGATGGAATATTGAAGGTTCATGCTGAGGATAAAACAACTGGAAATAAGAATGAAATTACCATCACTAATGAGAAAGGGAGACTCTCAAGTGCTGAGATTAAGAGAATGATTGAGGAAGCTGCAGTGTTCAGGGAAGAGGATAAGAAGTTTAAGAAGATGATCAAAGCAAAGAATGCTTTGGATGATTATATTTACAGGATGGAGAAAGCTATGAAGGATTTTGATGTATGCTCTAAGCTTTCACCTTCCGAAAAGGAGGCAACATTGTCTGCGTTCAGAAAGGGAAAAAGATTGCTTGAGAGTGAAGAGCATAATGAGGCTTGTGTGTTTGAGAACTATCTTAAAATGTTACAGAACATTTGTCAACCAACAGTGATCAACAAGGTCCGTGAATACAGTGATGAAGAATCTGATTTGGATGCATCAACAATTTCAGACATCAACCTCCTTCTTCGTCATAGAGCTTGA 1929 0.4069 MATKHKGPAIGIDLGTTYSCVAAWEEKEGRAEIIVNDRGNRTTPSFVAFTHTQWLIGDAAKNQAALNPSNTIFDAKRLIGRKYKDPTIENDLKLWPFKVVSGADDKPMIRVTYKGKEKCLAAEEISSMILMKMKDIAEAYMVSSVENAVITVPAYFNDSQRKATKDASIIAGLNVIRIINEPTAAAIAYGLQKRAKCSGKRNVFIFDLGGTFDVSLVTIEDEVFEVKATAGDTHLGGEDFDNRMVSHMAQEFIRKYKIDITGDPRALRRLRNKCEKAKRTLSHANDTTIEIDALFQGIDFHFSITRARFEELNRDFFEKCMEIAQNCLDDANMEKREVHDVVLVGGSSRIPKVQSLLQNFFEGKTICNSINPDEAVAYGAAVQAALLSEDYSVVPNLVLVDVTPISLGIGAHRDLMSVVIPRNTAIPVKMGSVFDTIKDNQSSMSLPVYEGERTKASENTLLAKFSLSGLPLVPRGHLVNVMFELDYDGILKVHAEDKTTGNKNEITITNEKGRLSSAEIKRMIEEAAVFREEDKKFKKMIKAKNALDDYIYRMEKAMKDFDVCSKLSPSEKEATLSAFRKGKRLLESEEHNEACVFENYLKMLQNICQPTVINKVREYSDEESDLDASTISDINLLLRHRA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00044 642 FunFam Heat shock 70 kDa 236 319 - -
Stsc90626g00044 642 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Stsc90626g00044 642 Gene3D - 73 128 - -
Stsc90626g00044 642 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 612 IPR029048 -
Stsc90626g00044 642 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc90626g00044 642 FunFam Heat shock protein 70 10 200 - -
Stsc90626g00044 642 SUPERFAMILY Actin-like ATPase domain 200 387 IPR043129 -
Stsc90626g00044 642 Coils Coil 267 287 - -
Stsc90626g00044 642 FunFam heat shock 70 kDa protein-like 73 128 - -
Stsc90626g00044 642 Pfam Hsp70 protein 9 611 IPR013126 GO:0005524|GO:0140662
Stsc90626g00044 642 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 544 IPR029047 -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 148 168 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 476 492 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 338 354 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 210 220 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 370 390 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 396 415 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc90626g00044 642 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc90626g00044 642 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Stsc90626g00044 642 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 548 IPR029047 -
Stsc90626g00044 642 Gene3D - 545 617 IPR029048 -
Stsc90626g00044 642 Gene3D - 194 367 - -
Stsc90626g00044 642 PANTHER HEAT SHOCK PROTEIN 70KDA 9 571 IPR013126 GO:0005524|GO:0140662
Stsc90626g00044 642 Gene3D - 10 385 - -
Stsc90626g00044 642 Gene3D Actin; Chain A, domain 4 236 319 - -
Stsc90626g00044 642 FunFam Heat shock 70 kDa protein 390 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00044 Stsc-Chr90626 208901 212209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00044 1 612 Calmodulin-binding Proteins AT3G12580 62.439 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00044 K03283 - gmx:102667578 774.622