Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00039 ATGTTACTCCTCTGTCTCTTGGTATTTTCACAAAAGGAGAGAAATTCTGTTCTTCCTACTAAGCATGAAAAGCTCCTTGGTACTTTTGAGGATAACCAATCGACGGCGAAGATAGCTGTTTATGAAGGGGAGAGATCAATGGCTTGTGATAACAACTTGCTGGGATTGTTTTGCTTATCTGATCTTGATCCTTCACCGCGACGCCACCCTATAAGAGTGTGCTTTGATTTGGATGAGAATGGTATTCTGAAAGTGTATGCTGAAGAATCAAAGACAGGGAAGAAGAAAGAGATAGAACACTCATGGATAGCTTCATCAGTGGCTTCTCCTTTTCCGTGTTCTGCTTCGTCGGAATCACAAAATTCAACGCAAGGTGAGACACAAGGCTCATCATCATCTTCGAGGCAAAATGCTAGGAGTCAAAGTTGGTCCTCTTCCATAACTACTGCCTCATCATCTAAATCAATCAATTCTTCTAAGACTCGATCTTCATCTTCTTCTAAACTGCAAAGTTCAGAGCAACACGTCACTCAACATTCCACTCATCATCATCATCATCATCATTCATCCTCATCTAAGTCGTCAAGACGTTCCTCCTCTCCCACTCATCATCATCATCATCCTTCATCCTCATCTAAGTCAAACAATTCTCCTTCTAAGGCTCGACGTTCCTCCTCTCCCACTCATCATCATCATTCACCCTCCTCTAAACTACCACAAAGTTTAAAGCAATACGGAACTCATCATCCCTCCTCTTCTGCCTCTCCTTCATCGTCTAAACCTCCAAGACCCACGCAACAAGGGAGTCACCGCTCATCTTCTAAAAAACGTTTGACAGAAGAAGACACCGGAAATAGGAGGAAGCAGATTAAGATTCCGGCTCATCTCCATAAACACAAGTTAACGTCGACGCCAGCCGGAACACTGTTTACCTGCGATGGATGCAAAGAACAAGGGTGTGGGCTCAGTTACCGTTGTGAAAAAAGAGATTGCAGTTATGTCCTCCACAAAGAATGTGCAAAGGCTGTTCGTAAAAGTGAAGAGCGCGTAAGTCATCCATTTTTTGAAGGAATAAAATTCAAGTTTCTAGAGAAACCAAAAGGGAGCCCTTGGATTTGTGATGCATGCAGAATGGAAGTGAAAGGGTTTGTGTATCATCATCGCCAACCGTCAAAAGACCTCTACAACACAGGCTTAGATTTGCATCCATGTTGTTTTAAGCTGAAAAAACGAATTTCTAATAAACAAGAGTCGTCATCAGGTGAAAAAATCACACTCAAATTGCAACCAGATGTTCCGGGAAAGTGTATGAAATGTAAGCATCGGAAAGTTAAGGGCGATACCAAAGTTGGAGGGTGGTCATATAATTTAAGTGCTTCCGATGGAGATTATTGCTTTCATGTTTCTTGTTTTAAGAAACTCATTCTTGAGACACTGGAAAAGGAAGGTTTCTCCGACGGAAAGAAAGTTACAGTATCGTCAATAAGGAAGACCGGTTTCAAAGTTGGAGGAAGATCAAATTCATCATCATTAGGATTTAAGATAACAAAGGTTGTCGTCAAGACAGCTATAACAGTGCTAATCAAGCTATTATTTTCATTAATTCTTGGAGGAGGTCATCCAATTGCTCTTCTTCCTGCTCTTTTGCTCGTTTTCAAGAGTGCATGGGTTTTACATTAA 1680 0.4137 MLLLCLLVFSQKERNSVLPTKHEKLLGTFEDNQSTAKIAVYEGERSMACDNNLLGLFCLSDLDPSPRRHPIRVCFDLDENGILKVYAEESKTGKKKEIEHSWIASSVASPFPCSASSESQNSTQGETQGSSSSSRQNARSQSWSSSITTASSSKSINSSKTRSSSSSKLQSSEQHVTQHSTHHHHHHHSSSSKSSRRSSSPTHHHHHPSSSSKSNNSPSKARRSSSPTHHHHSPSSKLPQSLKQYGTHHPSSSASPSSSKPPRPTQQGSHRSSSKKRLTEEDTGNRRKQIKIPAHLHKHKLTSTPAGTLFTCDGCKEQGCGLSYRCEKRDCSYVLHKECAKAVRKSEERVSHPFFEGIKFKFLEKPKGSPWICDACRMEVKGFVYHHRQPSKDLYNTGLDLHPCCFKLKKRISNKQESSSGEKITLKLQPDVPGKCMKCKHRKVKGDTKVGGWSYNLSASDGDYCFHVSCFKKLILETLEKEGFSDGKKVTVSSIRKTGFKVGGRSNSSSLGFKITKVVVKTAITVLIKLLFSLILGGGHPIALLPALLLVFKSAWVLH 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00039 559 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 12 139 IPR029047 -
Stsc90626g00039 559 Pfam Hsp70 protein 11 189 IPR013126 GO:0005524|GO:0140662
Stsc90626g00039 559 SUPERFAMILY Cysteine-rich domain 331 411 IPR046349 -
Stsc90626g00039 559 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 288 535 - -
Stsc90626g00039 559 MobiDBLite consensus disorder prediction 273 289 - -
Stsc90626g00039 559 Pfam C1 domain 296 340 IPR004146 -
Stsc90626g00039 559 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 13 99 IPR029047 -
Stsc90626g00039 559 MobiDBLite consensus disorder prediction 113 176 - -
Stsc90626g00039 559 MobiDBLite consensus disorder prediction 179 210 - -
Stsc90626g00039 559 MobiDBLite consensus disorder prediction 113 289 - -
Stsc90626g00039 559 MobiDBLite consensus disorder prediction 231 272 - -
Stsc90626g00039 559 SUPERFAMILY Cysteine-rich domain 295 343 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00039 Stsc-Chr90626 189856 194156 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00039 13 98 Calmodulin-binding Proteins AT5G02490 54.023 1.07e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00039 - - aip:107635674 276.559