Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90626g00035 ATGGGTTCTACGAATCAAGGGGCTCGTCATCGCCGTGACGATGTACTATCATTGCCCGATCCACCGGTGATTCTGAAGGGACCACAGAATTACCTGCAGTGGCGCCGGGCAATGAAGCTGGAGTTGGAGCGGATAGGGATGCTATCCATTTTGGATGAAACCGTTAGGGTTCCAGCAGTAGTACTGGGGAACCGAGACTATAACAATGAAGAAAAGCTACCCAAGATGCCGATCATCAATGAACCTACTGCTGCAGCTCTAGCCTATGGCCTTCAGAAGAGAAGTAATTGTTCCGAAGAGCGAAATGTTTTCGTCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTTGTTACAATTAAAGATGTTTATCAAATTAAGGCTACTGCTGGAGACACTCACCTTGGAGGAGAGGATTTCGATAACAGAATGATCGATTACTTTGTGAAGGAGTTCAATAAGAAGCACAATGTTGACATTAGTGAGAATCCAAGGTCTCTTAGGAGGTTAAGAACTGCATGTGAGAGGGCTAAAATGAATCTTTCATTTGCTAAACAAACAACAATTGAGGTTGATTCATTGTTCCAAGGCACTGATTTTTACTCATTGATAACTCGTTCAAGGTTTGAGGAACTCAACAAGGACTTGTTTGTGAAGTGTATGGACACTGTTGAGAAGTGTCTTGATGATGCTAAAGTGGACAAGAACAATGTTCATGATGTTGTTCTTGTTGGTGGATCTTCAAGGATTCCAAAACTTCAGGAACTTTTGCAGGAATTCTTTCTAGTAAAGGATCTTTCCAAAGGCATTAACCCGGATGAAGCTGTTGCTTATGGTGCTGCAGTTCAAGCTGCTTTATTGTCTGAAAGCATGAACACTGCTTTGGATTTGGTTCTGTTAGATGTTACTCCTTTGTCTCTTGGTATTTCAACAAAAGGAGATGTAATGTGTGTGTTCATTCCAAGAAATTCTGTTCTTCCTACTAAGCATGAAAAGCTCCTTGGTACTTTGGAAGATAACCAATCGACGGCGAAGATAGCTGTTTATGAAGGGGAGAGATCAAGGGCTAGTGATAACAACTTGCTGGGATTGTTCTGCTTTCTGATCTTGATCCTTCGCCGCGGCGCCACCCTATAA 1137 0.4248 MGSTNQGARHRRDDVLSLPDPPVILKGPQNYLQWRRAMKLELERIGMLSILDETVRVPAVVLGNRDYNNEEKLPKMPIINEPTAAALAYGLQKRSNCSEERNVFVFDLGGGTFDVSLVTIKDVYQIKATAGDTHLGGEDFDNRMIDYFVKEFNKKHNVDISENPRSLRRLRTACERAKMNLSFAKQTTIEVDSLFQGTDFYSLITRSRFEELNKDLFVKCMDTVEKCLDDAKVDKNNVHDVVLVGGSSRIPKLQELLQEFFLVKDLSKGINPDEAVAYGAAVQAALLSESMNTALDLVLLDVTPLSLGISTKGDVMCVFIPRNSVLPTKHEKLLGTLEDNQSTAKIAVYEGERSRASDNNLLGLFCFLILILRRGATL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90626g00035 378 ProSitePatterns Heat shock hsp70 proteins family signature 3. 241 255 IPR018181 -
Stsc90626g00035 378 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 286 377 IPR029047 -
Stsc90626g00035 378 SUPERFAMILY Actin-like ATPase domain 99 288 IPR043129 -
Stsc90626g00035 378 Coils Coil 167 187 - -
Stsc90626g00035 378 Gene3D Actin; Chain A, domain 4 137 219 - -
Stsc90626g00035 378 PRINTS 70kDa heat shock protein signature 238 254 - -
Stsc90626g00035 378 PRINTS 70kDa heat shock protein signature 111 121 - -
Stsc90626g00035 378 PRINTS 70kDa heat shock protein signature 296 315 - -
Stsc90626g00035 378 PRINTS 70kDa heat shock protein signature 270 290 - -
Stsc90626g00035 378 ProSitePatterns Heat shock hsp70 proteins family signature 2. 105 118 IPR018181 -
Stsc90626g00035 378 Pfam Hsp70 protein 77 365 IPR013126 GO:0005524|GO:0140662
Stsc90626g00035 378 PANTHER HEAT SHOCK PROTEIN 70KDA 76 365 IPR013126 GO:0005524|GO:0140662
Stsc90626g00035 378 Gene3D - 73 285 - -
Stsc90626g00035 378 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 296 366 IPR029047 -
Stsc90626g00035 378 FunFam Heat shock 70 kDa 136 219 - -
Stsc90626g00035 378 Gene3D - 94 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90626g00035 Stsc-Chr90626 168240 169820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90626g00035 76 365 Calmodulin-binding Proteins AT3G12580 67.808 1.16e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90626g00035 K03283 - gmx:102667578 391.734